SimpleSearch - Line and FST details


Line specific information

 
Line ID 179B12
Vector Used pAC161
Line Availability available as T3 set from NASC (N417112)
Segregation Analysis 100:97:86
Confirmed for Hit At1g52580
Parent of DUPLO pair none
Parent of pair(s) 93467

Gene hit At1g52580

 
Sequence (A. th genome BLAST matches underlined) 
>90-K013563-022-179-B12-8409
GAAAAAGACCAAACACCGATATTCATTAATCTTATCTATGGGATCCTCCCTATAGTGAGA
ACGGGACCGTGAACCCAAATACCTTCCTCCTGGTTATGACATGAAACACAAGAAATCGGA
CACAAGAGTTATCAACGCATCTTCATATTAACATCTCTATGGGATCCTCCCTATAGAGAG
AAAAGGCTCTATCACGAGCCATTTACCTCACTAAGGAATGAATATGGAAGATGCGTCGAC
GGATCCATATAGGAGGGGAAGATATGAATG
GenBank Accession BX546571 [GenBank]
Graphic View Graphic view of gene At1g52580
Predicted Position of Insertion Chr1:19588569 - go to primer design
BLAST e Value 1e-19
Hit Clone Code (BAC ID) F6D8
Hit Gene Code At1g52580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RHOMBOID-like protein 5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37