SimpleSearch - Line and FST details
Line specific information
| Line ID | 179C09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N417121) |
| Segregation Analysis | 50:29:24 |
| Confirmed for Hit | At3g09360 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 1051, 93098 |
Gene hit At3g09360
| Sequence (A. th genome BLAST matches underlined) | >67-K013563-022-179-C09-8409 GTGATCCATGTAGATTTCCCGGACTGAAGCACTTTACAATTGAATATATCATTACAAATG GTTCCCAGAGTTAACAATCAATGTTTTCTTTTGCAATTTTTAATGCAGTTCATAAATGTT TCTGGTGGACTTGTTGGTGGGTCCAATCCTCCTGCTTTCCAGCGCGCAGAGAAAGAGCGA ATGGAAAAAGCAGCTATGGGATCCTCCCTTNAGGTGAGGAATCTGTCCGAATCGACCACG TGTTTTGACCACCTAATTGTGAAAAAGAGTTCTCGGCTGGTGCTAGGANGAACGTGAGTC GCCACTCATCACAACTCCATGCATGTCGATGGGATCCTCCCTATAGTGAGCCTGCCTACA GTGGGACCAACATTGGACCCCCACGCCTCTATGATCATTGTGGAAAAAGAAAACAGGCCC ACACACCTCTTAAAGCGCCTGAGTTTACCCGCATGTTCCCCCCGCCCCAAAGGAGTAATC CAAGACGCCCTCTGCGTTTCCGAAGCCGCTTCTCTATATATAACGAAGTCCCTCCATTTT TCGAACAGAAACGGATTTCCGGGGGGACAACTATGCAGATTTCACGCCCATGGGCCAACA CGACGCGCGGTTTTACCTCCGCGGCCGCACCTCCCCACTGACGCGCGCCGCGCGTCCGCG GGCGCGCCGCCCGCGGCGCCGCGCGCGTTTGCCCTAAAAATAGCAAAACCCCGGACCGGG AAGCTAAACCCGCCCCCCGGCGGGGGAGCGCGCCGCGGGCGCGGCGGGCCGGCACGCCAC GCGAACACCTCACCGCCCGCGGCNCGCTGGGTCGAGTACCGGCTGCGACGGCGACCGCCC GCCACGGGCCCGCCGAGGGCGATACGCCGGCGCAATATAAACCACGGCACACCCGCCGGC AGGATACGAGCCGCGGTCGCCGTACCGCCCCCCACGTCGCCGCCGCCGTCGCTG |
| GenBank Accession | AL771329 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:2876607 - go to primer design |
| BLAST e Value | 6e-71 |
| Hit Clone Code (BAC ID) | F3L24 |
| Hit Gene Code | At3g09360 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Cyclin/Brf1-like TBP-binding protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T12K4
| Sequence (A. th genome BLAST matches underlined) | >67-K013565-022-179-C09-8409 GTGATCCCTGTANGATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCCGGTCAT AACCGTATATAATTAAAGCTTTCCGGGTCATTAAGTATATTAATTCTGACCCGATTAGCT TTTCTTAAAATATACTTCAAAAATGTTAATTTAGATATTGGATACCCAATTAGTTAATCA TGTCGGACCGAGTCAGATCAGATTTTCGAACATAAATCTTTATCTCTCCGAATTGAACCA AATATTAAACCAAACCAATTTGTAAAAAGAAAAATCGGTTTGGTTTGGATCAATAGAATC GGGTCGCATCAAAACTCCATGCATGCCTATGGGATCCTCTA |
| GenBank Accession | AL771330 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:14750752 - go to primer design |
| BLAST e Value | 4e-146 |
| Hit Clone Code (BAC ID) | T12K4 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | AL771330 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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