SimpleSearch - Line and FST details
Line specific information
| Line ID | 180A01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N417185) |
| Segregation Analysis | 50:49:39 |
| Confirmed for Hit | At1g75500 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3214, 7021 |
Gene hit At1g75500
| Sequence (A. th genome BLAST matches underlined) | >01-K013611-022-180-A01-8409 TTTGATCCATGTAGAATTTCCCGGACCATGAAGCCTTTACAATTGAATATATCCTGTGAT TGATTGAGTTGATTCTCTGCCAGCACTTTTTCTCCAAGATTTAACACAGAGAACGAGAGA TATGGAGAACAAAACTCAAGAGGAAGCTTGAACCATCAAAGTTTCATCCCTTACTTGCAT AGATCTTGCCAACCCGAACTTTCAACAATCAGCGGTTTCTCTTAAACAGGTATGTTTTTA TTTTTTCTTTATTATAGCTAAGTATGTCAAAAACATTTTATTTTCAGATATGTATGGAAA AAAAAGTTGACTCGTTGTGTGTGGGTTATTCTTGTTCCAGGCATGGCTATGGGATCCTCC CTTTAGGGGAGCANAAAAGAAACGGATAATAATACACGTANACAATATTTAATGCCGTTT CCATTTGCTTACAAAATAGTGATAATCATAGTAGTAACAACAATGTAACATACTGTTTAT GTACTGTATGTGAAAAAAACAATAATTCAGGATTGAGAAAGTAAGAATAAACAGAAGAGA CGGTATCTCCAAAATCTTAGGAACAGCTCTTTGTGTCGCCGGAGCTTCCGTCATCACCCT ATATAAAGGTGCAACCATCTACACTCCGGGTAGCCACCTCCACGCTCATCTACTCACCAC AAACTCCGCCGTCTTAAGCGCCGCTATGGGATCCT |
| GenBank Accession | AL771417 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:28339715 - go to primer design |
| BLAST e Value | 9e-150 |
| Hit Clone Code (BAC ID) | F1B16 |
| Hit Gene Code | At1g75500 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Walls Are Thin 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g57000
| Sequence (A. th genome BLAST matches underlined) | >01-K013602-022-180-A01-8409 CTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATGCTGGCTTC GTACGAAAACGTAATCTATGTCCTTTATGGTTATCCCTACTACACAGAAACAACTCGATA TATGCAGAACAAAACTAGCTAGGATGCTAAATCACATTCGAGCCCTTTTCTTAACTACCG TTAATAGAGACAACCCTCGCTTACCGCAACTTTTGGAGCTTGTTAAAAAAGTCTGGTGAT CTTGCGACTGTATACTGACTTAACCCTGCTTCAAACATTAAAGTAGGCGATATGTATATG AAAAAGAAGTTGGCATTGTTGCGCGCGGATTATATTAGCGCCAAGCGGCTCATTGGGATA CAATATGCCCCATTAAGTTTTAGGGTTTTTAAAAGGCCCAGAAAAAGAAAAAGAGACCAA GAAACCTATGGGATCCTCCCT |
| GenBank Accession | AL771416 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:21092517 - go to primer design |
| BLAST e Value | 1e-25 |
| Hit Clone Code (BAC ID) | F24I3 |
| Hit Gene Code | At3g57000 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | nucleolar essential protein-like protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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