SimpleSearch - Line and FST details
Line specific information
| Line ID | 183G07 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N417551) |
| Segregation Analysis | 50:30:20 |
| Confirmed for Hit | At5g01770 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 12765 |
Gene hit At5g01770
| Sequence (A. th genome BLAST matches underlined) | >55-K013614-022-183-G07-8409 TGATCCATGTAGATTTCCCCGACTGAAGCACTTAACCCGGAATAGATTCTTGGAGGCTGC TTGAGATCTCTCTCTTACGAGCCACTGTGTGGCTATCCGTGCTACGAGGACTCCTCCATA TATGCGAGTACTATTCGCAGAGTGTTCTATGGGATCCTCCCTATAGTGAGACNNNNNNCC TTNCNCCNNTACACATATCACATNAANACAATNGCTTTCAAGACCTGAACACAACGTATG ATTTTTCCACTATGCCCCTATGCGCAGGGGGTCCATCTGTCGGACCACTGTACCACGAAC CACCTACAACTATGGCCTTTCCTTTAATCGAATGATGCCATTAGTACGAGCCACCTTCCT TTCACACTATTTTCATATCAAAACGACACACAGCTGGGCAATGGAACCCTAGGA |
| GenBank Accession | FR805309 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:297252 - go to primer design |
| BLAST e Value | 0.002 |
| Hit Clone Code (BAC ID) | T20L15 |
| Hit Gene Code | At5g01770 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | regulatory-associated protein of TOR 2 (RAPTOR2) |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | FR805309 [GenBank] |
Gene hit T5E8
| Sequence (A. th genome BLAST matches underlined) | >55-K013595-022-183-G07-8409 CTGATCCATGTAGAATTTCCCGGACATGAAGCACTTTACAATTGAATAGATACCATTCTG ATGTTGGAAAATCCATGATGGTATCAACAATGGAGTTGTCCATCACTCCAAGACCGCTGG ATAATGCTATCTATTCGCAGAGTGTCCTATGGGATCCTCCCTATAGTGAGAAATCGCAAT CTTCTCAATATATATATATTCACCTTCACATTTGACAACAAATTTAGACGATAATCGATA CGGGACCCACATAACATCGGACCATGCAAAGAACTGTATATAATTTTATTTACACTCAAC CGTCTTTTCTATTGGAAAATACTTAAACTCCCTTTACGAAACCCCACCAATCAAATAAAA GGCCCCCTAAAACCGCCTTTTAAATACAGATCGCCTAATAGAAAATTTCTGGGAAAAATG CAAAAACTACGCTTCTGCACATAGTAAATTTTATCCTGTGGGAAAAAAAAACTCTATCTT CGAACCAAACCCCAAACACATTTTCTATAAACACCATCGTGGCCCCACCCTTTTCAACAA AAAAAAAAAACCCCTTTATCTCCGAAAAATAACGGAAAAAAAAACCCCCCGCAATTTAAG GAAACAACAATTCACACAAAGTCAATAACAAAATATTTAACATTCTTGAAAAACACCTTT GCACTTTTCCAAATTCCACAAAACGCCCGGTTTTCTTGAAAACACATTC |
| GenBank Accession | AL771859 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:2933916 - go to primer design |
| BLAST e Value | 3e-29 |
| Hit Clone Code (BAC ID) | T5E8 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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