SimpleSearch - Line and FST details


Line specific information

 
Line ID 185D08
Vector Used pAC161
Line Availability available as T3 set from NASC (N417708)
Segregation Analysis 50:45:36
Confirmed for Hit At1g52100
Parent of DUPLO pair none
Parent of pair(s) 96917, 96926, 96928, 96929, 96931

Gene hit At1g52100

 
Sequence (A. th genome BLAST matches underlined) 
>60-K013650-022-185-D08-8409
GTGATCCATGTAGAATTTCCCGGACATGAAGCACTTTACAATTGTAGTAAGATATATTGT
CGGCTAAACCTAATAGAAAAGAGCGTTTATACAATAATCGAGATATTTAAAAGGGCGTGA
AAAGGTTGTATCCGTTACTACCATTTGTATGTGCATGCCAGACCACAGGGTTCCCCTCGG
GAGTGCTTGGCATTCCGAGCGATAATGACTTCTGTGCAACCACCCAAACGCCGGAAAGCC
TGACGACGGAGCAGCATTCCAAAAAGATCCCTTGGCTCGTCTGGGTCGGCTATGGGATCC
TCCCTANAGTGAGCNNCNANNGATGANGAATNATTATGACCACCTCATGTTGTGATCCGG
TCTTGGCCCCGCGCTCACGAGTTTCCACTTGACCGGCTTTGGCATAGTCGAACCTTACAT
GCCTAATTGCAGAGCCATCAGTTGTAACGTACACTTTTGTTATGCCGTCGGCGGCCCCAC
CATCATCAAAACCTTTTCCTGTGGGTGTAACATATTCGATTGGCTGAGGGCAGGAACGCA
CCTATATCGCCCCCCCCCCCACCACAGCTCGCATCCCCCGCATGTAAATCGGTTAAACCC
AATAATATTTCCTCCGGCGTGGGGCGCGCTGCGTGTAAATTCGCCCGCCCCCCCCCCGCG
TTTATACGCCTCCCAGTCTGGCATTTTTGGGCGGCCGCTGTGATCCGCGCCGAGGTGGTT
ACGCGCCGTTCCCGGGCCGCCGCCCGGATTGTTTCTCTATTACCGCCTTATCGTCCCCGG
GAGGGCGGGTCGATCCGCCCGGCCCTGTGCCCGATGTTGTTCTCCCCGGCGCCGCGGGCC
GGCTGTGTCGCCGATCGCGCGGCCACCCGGAGAAGATATTTTTATATATTCT
GenBank Accession FR805330 [GenBank]
Graphic View Graphic view of gene At1g52100
Predicted Position of Insertion Chr1:19384370 - go to primer design
BLAST e Value 6e-74
Hit Clone Code (BAC ID) F5F19
Hit Gene Code At1g52100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Mannose-binding lectin superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL772011 [GenBank]


Last Updated on 10.06.2021 13:37