SimpleSearch - Line and FST details


Line specific information

 
Line ID 186B08
Vector Used pAC161
Line Availability available as T3 set from NASC (N417780)
Segregation Analysis 50:24:22
Confirmed for Hit At1g53990
Parent of DUPLO pair none
Parent of pair(s) 4090, 4165, 68523

Gene hit At1g53990

 
Sequence (A. th genome BLAST matches underlined) 
>58-K014622-022-186-B08-8409
TTGATCCATGTAGAATTTCCCGNGACATGAAGCCTTTACAATTGAATATATCCTGCCGGC
TAAAGCTCCGGCGCCAGCAGAAGCAAAACTTACTCCATAGGTAAATTGATTGTTACCGTT
GTTTGGTTGTAGATTTGGCGGGATCGACGGCAACCATGCCTTTTCGGCTTCCAGGTCAGC
AATTAGTGAATAAAAAAATGTTAAACATTCCTATGGGATCCTCCCTTAAGTGAG
GenBank Accession AL772103 [GenBank]
Graphic View Graphic view of gene At1g53990
Predicted Position of Insertion Chr1:20151475 - go to primer design
BLAST e Value 5e-71
Hit Clone Code (BAC ID) F15I1
Hit Gene Code At1g53990 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GDSL-motif lipase 3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g46090

 
Sequence (A. th genome BLAST matches underlined) 
>58-K014618-022-186-B08-8409
TTGATCCATGTAGGATTTCCCGCACATGAAGCACTTTACAATTGAATATATCCCGGGCCG
TTTTTTATCTTCAAAGTTTTAAAAAGGCCTATTTTATCTATGGGATCCTCCCTATAGTGA
GACCGCAGCGGGACTCCGATTTGCAACATCAGGCTCCCCACAGAATCTGAATAGGCCGCT
TCTTCTGCAGAGATCCAGCATCCCGACTTTCCTCCCTATCGCCTAACACCCAAAACTGGA
TCAGTCCGTCATTCTAAACCCACGTCCCAGAGGCACAGAAACGGTAAGAACCACCAAACC
ACCCCATCGCCTAAGATGG
GenBank Accession AL772102 [GenBank]
Graphic View Graphic view of gene At2g46090
Predicted Position of Insertion Chr2:18950810 - go to primer design
BLAST e Value 3e-17
Hit Clone Code (BAC ID) T3F17
Hit Gene Code At2g46090 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Diacylglycerol kinase family protein
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37