SimpleSearch - Line and FST details


Line specific information

 
Line ID 186E10
Vector Used pAC161
Line Availability available as T3 set from NASC (N417818)
Segregation Analysis 50:9:8
Confirmed for Hit At4g02690
Parent of DUPLO pair none
Parent of pair(s) 66130, 95996, 95997, 95998

Gene hit At4g02690

 
Sequence (A. th genome BLAST matches underlined) 
>77-K014618-022-186-E10-8409
NTGATCCATGTAGATTNTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGAAAAT
CCCGGTAACGCCTGAAAATCCAGCGATGCATGAAAATCCCGAGCTCCGGTGGGGATTTAT
ACGCAAGGTCTACTCTATAATCGCCTTTCAGCTTCTATGGGATCCTCCCTATAGTGAGAG
NNANNNNNAANNNNNNNNNNCCCCTTTTTNTTTTATTAAAAAAAGAAAAATGTCCCCCCC
GCTCTCACAACCACCCATCAACCCCCCCCCCTAACACACAAACCTCCTCCCCACCGCCAA
CCCCCCCTCCTCCCGACCACATAAATCTCATACCCAACGCGGCCCGAGGCCCTGACACTG
TAACACCCAGGAACCAAACAAGGGAGAGACAAACACAAGC
GenBank Accession AL759375 [GenBank]
Graphic View Graphic view of gene At4g02690
Predicted Position of Insertion Chr4:1186077 - go to primer design
BLAST e Value 3e-36
Hit Clone Code (BAC ID) T10P11
Hit Gene Code At4g02690 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Bax inhibitor-1 family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T2H7

 
Sequence (A. th genome BLAST matches underlined) 
>77-K014622-022-186-E10-8409
NTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATATCAACTTATA
TATATACGAGATTCTTAAACTATTGTAGTCATTAAAAATCCACGTAAATCAAAATTGAAT
AAATCCCCGCTAATAGTCATGATTTACACTTTACGAGTCCCTAACCAAATATCATCCGTT
ACTCAAATCTCCGTCTTTACTGGTTCTTTTAGTTACCAATAATCACACAAGACCCATTTT
GAAACAAGGCCGTTCATTTTATTTGATCAATATAGTATACAATTTGTAAACAGAAATTAT
ATTCTTTAACATTCAACTAAATTTTTTCATAATTTGACGTGAATAGGCAAGAACTTAAAC
AATAATTAAACTCATAACTACAAAACCTATGGGATCCTC
GenBank Accession AL759376 [GenBank]
Graphic View Graphic view of sequence AL759376 of line 186E10
Predicted Position of Insertion Chr1:10597664 - go to primer design
BLAST e Value 5e-176
Hit Clone Code (BAC ID) T2H7
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37