SimpleSearch - Line and FST details


Line specific information

 
Line ID 190F11
Vector Used pAC161
Line Availability available as T3 set from NASC (N418215)
Segregation Analysis 100:100:79
Confirmed for Hit At4g02080
Parent of DUPLO pair none
Parent of pair(s) 3434, 3447, 3616

Gene hit At4g02080

 
Sequence (A. th genome BLAST matches underlined) 
>86-K014641-022-190-F11-8409
TTGATCCATGTAGCATTTCCCGGGACATGAAGCCTTTACAATTGAATATATCCTGAACAT
GACTAACTCAGATCCTCCAACCACAAAGCTCAAATATTATCCGATCGAGAGAGAGAGAGA
GAGAGAGATCGTCGGGTTTCTAATTTATCTTTGAAGACCACGAGAGAGGCGTTTCTGAAT
TGAAAAGTAAAGTAAAAACGGAAAACGGCGAGCAGTGCGGATTCCTAAATCACAAACGGG
AGTCACAACGATGCTTGTGTCTTCTACGTCAAAGGCGCGCCCATTAGAGGACCCAATACG
CCCATTTATATATTTACATTATCTCAAGTTCCAAGTGGTCTTTTAAGACAAGAAATAAAT
TTTCCTTTGCGACACTACAGGTGTGTAGTGTAAGATCTAAAATATTTTTAAAATTTTGGC
GATTTTTGTGTTTTCAATTGAAACACTTCATACTCGTGACTCGGAATTTATCGTTGTGTT
TATAACGTCATAGCATAATTAAAACACATTCTACATTTGATTCTATTAATGTATGTAACA
TTACACAAAAACATTTTACGACGTGACACACAACATTTAGGGTTACCGGGTTTATCACAT
AAACAAAAGAGCCGGCAAAATAGCGACAAAGGGCTAACTGGGTGAACCGGAATAAAAAAA
AGGTCCTCATACCAATTTTATTAAAAGG
GenBank Accession AL759785 [GenBank]
Graphic View Graphic view of gene At4g02080
Predicted Position of Insertion Chr4:921560 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T10M13
Hit Gene Code At4g02080 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation secretion-associated RAS super family 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37