SimpleSearch - Line and FST details


Line specific information

 
Line ID 191D02
Vector Used pAC161
Line Availability available as T3 set from NASC (N418278)
Segregation Analysis 57:6:6
Confirmed for Hit At2g46340
Parent of DUPLO pair none
Parent of pair(s) 3453, 3469, 7136

Gene hit At2g46340

 
Sequence (A. th genome BLAST matches underlined) 
>12-K014644-022-191-D02-8409
TTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACCGTCGATGTCCATAAGAGGAA
AAGAGTTTGGGAATCGATGTGAACATGATGCCACCTCAGGCTCTACGAGATGGCAATAGA
GCAAGGAACATCGTCTATACAATGGGCCATGGAGACTTCTCTTATTCTACGCACACAGGC
TAGTGGCATCCTCTCTATTTTGAGCACTATGTACTGTCATATCCTGCTTATGTGGGCTTT
GGGTAGTTTATATTCTTTCATTTTCATGAAATTTCTTACCCTATGGGATCCTCCCTGTAG
TGAGANNNNNGGGGNATACTACTGTGTGTTTCTTNCCTCGATTTTTTTTTTGAAATCCGA
AATTTTTTGTTTTTTCTGGGGTTGCCTATGTGATTTGAT
GenBank Accession AL759836 [GenBank]
Graphic View Graphic view of gene At2g46340
Predicted Position of Insertion Chr2:19025474 - go to primer design
BLAST e Value 9e-36
Hit Clone Code (BAC ID) F11C10
Hit Gene Code At2g46340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SPA (suppressor of phyA-105) protein family
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g23750

 
Sequence (A. th genome BLAST matches underlined) 
>12-K014642-022-191-D02-8409
NTGATCCATGGTAGATTTCCCGGACCTGAAGCACTTTACCGTTGCCGTTTACTGAGGGGC
ACCAGTGTCGGGTCTTTGGTGAAGTTCACGGCCTGTGCAGCGTTCAGCT
GenBank Accession FR805431 [GenBank]
Graphic View Graphic view of gene At3g23750
Predicted Position of Insertion Chr3:8561022 - go to primer design
BLAST e Value 0.095
Hit Clone Code (BAC ID) MYM9
Hit Gene Code At3g23750 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37