SimpleSearch - Line and FST details
Line specific information
| Line ID | 191D09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N418285) |
| Segregation Analysis | 100:96:91 |
| Confirmed for Hit | At5g04630 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 4064, 4199, 4265, 9905 |
Gene hit At3g62050
| Sequence (A. th genome BLAST matches underlined) | >68-K014644-022-191-D09-8409 NTGATCCATGTAGATTNTCCCGGACATGACGACAATGATCGAGATGGGAATGCTCGACAA AGCCTACGATATCTCACGGCTGGCTGTCTTGGACGAATATCGAGTCGATAGAGACATCGT ATTCATCTGCAATTCCGATATATAATCTCGTTTAATTATAAAATCTAAACCCTAATTCTC TTTTGTAAATCCAAACCACCATTTAAACTCGTTTAATCGTAAAACATTTACAGTTTACAT GTGTATTATTACCAAAGAACCAAACACTCAGAAATTGCATCAGAGAAATAAGGCCCAGTG TGTGGTCCAAGTCATAATTTTTGTTTGTACGTATAATGAGCCTGAGAATGAGAATTGGGC TATGATGTGGCCCAAGTCGTGCTTTTCCTAACTTGACAAGAGAAGTTACAAAAGTACCCA CAGCTACTTGGTTGTGTTATGTGCTTTAGTAGGGGTAGAATCGAAATTAGGAAACCACCT GAGACCGAGAAGAAACACACAATTGCTTTGCTCTCTCGTCCGCAGCCACAGAGGTTGAAC CCTATGGGATCCTCC |
| GenBank Accession | AL759844 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:22977741 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F21F14 |
| Hit Gene Code | At3g62050 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Putative endonuclease or glycosyl hydrolase |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
Gene hit At5g04630
| Sequence (A. th genome BLAST matches underlined) | >68-K014642-022-191-D09-8409 NTGATCCATGTAGATTATCCCGGACATGAAGCGCTTTACAATTGAATATATCCTGACAAG CGCTATGGGATCCTCCCTATAGTGAGAACCGATTGAAAGAATGTGGTCTAAGATGAAAGA GATTCTTTGCGCCGTTGGTGCACAAATTCACAACTATCTTCCGAGACTACCTCCGGCTTA CTTGAGGGATAGGAAAAAATCTCTGCGGCTTCTCCGGAAACTAGTCCAGATCATCATCCG ATTCCTCTACAATCGACGATTGTCGAGTCCCAATCTCGGCTCCGATAAACCGGCGTCGTC TTTCGCGTATCTTGATACTTTATTCGATCTCAGAGCTGATGGTCGAGAAACGTCACCGTC ATATGAAGATCTCATGACGCTGCGTTCAGAGTTTCTCAACGCCGGTACGGATACGACGGG GACGGCGATAGAGTGGGGAATCGCGGAGCTGATATCCAATCCGACGATTCAATCTCGGCC TGACGATGAGATTAACACACCGGCGGGAGATGATCGAACGGCTGAAGAGAAACATTTGAT TACAACGGTCTTTCCACAAGCTTTTGCTCAAGACCTTATTCGGAGACATCCATCGACGTA TGTCCACGTTACCTCATGGCCTTCCCGACCCCGAATAATCTAGGGGGTTACGATATTCCC |
| GenBank Accession | BX649766 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:1331237 - go to primer design |
| BLAST e Value | 7e-123 |
| Hit Clone Code (BAC ID) | T32M21 |
| Hit Gene Code | At5g04630 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | cytochrome P450, family 77, subfamily A, polypeptide 9 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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