SimpleSearch - Line and FST details


Line specific information

 
Line ID 192H04
Vector Used pAC161
Line Availability available as T3 set from NASC (N418424)
Segregation Analysis 50:50:47
Confirmed for Hit At2g28140
Parent of DUPLO pair none
Parent of pair(s) 93566

Gene hit At2g28140

 
Sequence (A. th genome BLAST matches underlined) 
>32-K014647-022-192-H04-8409
NTGATCCATTGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCATGTAAA
GGGTACTTGGTCTCTCTTTTGGAATCACACGTGAACCCTCTTCCTGTTTAGATTATTCCC
ACAACTATCTTGTGACAAGTGGTGATCCTTCAACAATAATCACCGATGGAATTTCAAAGG
ACTCAAGTTGTGGTGGCGGGTGACGCCATTGTGGAAGCTGTCCAGCTATGGGATCCTCCC
TTGAGCAGAGATAGAGGATGNTGTATGGAATCTGCAGTACACAATGCAAGTGCAACAAGG
ATGGACACGCACTGAGAACCTGGGGCTTGGTGGGTCAGAGCTATAGAAGAGAGATATA
GenBank Accession AL759997 [GenBank]
Graphic View Graphic view of gene At2g28140
Predicted Position of Insertion Chr2:11995794 - go to primer design
BLAST e Value 4e-75
Hit Clone Code (BAC ID) F24D13
Hit Gene Code At2g28140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation enabled-like protein (DUF1635)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g42438

 
Sequence (A. th genome BLAST matches underlined) 
>32-K014648-022-192-H04-8409
NTGATCCATTGTAGATTTCCCGGACATGAAGCACTTTACCGGAGCATTGATGCCTTGACA
ATGTGAACTTAGTATTACTCCAAGCTGGCACACATCTTCTTTCTCTCCATCTTAATTTCT
ATAGGATTACTATAGAGACAACGTTGATTCTGACATGCTGGATACGCGAAAGAGAATGTT
GGGAAAGAGGTGGTGGGGACTAATGATGACACATACAAGACCCTAGAAGCATATGTTGTA
TGTTCTAAAACTTACAAATCCTATGGGATCCTCC
GenBank Accession FR805461 [GenBank]
Graphic View Graphic view of gene At3g42438
Predicted Position of Insertion Chr3:14575558 - go to primer design
BLAST e Value 7e-18
Hit Clone Code (BAC ID) T32A11
Hit Gene Code At3g42438 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification TS2TE
Confirmation Status unknown


Last Updated on 10.06.2021 13:37