SimpleSearch - Line and FST details


Line specific information

 
Line ID 196F10
Vector Used pAC161
Line Availability available as T3 set from NASC (N418790)
Segregation Analysis 50:6:5
Confirmed for Hit At1g17930
Parent of DUPLO pair 11817
Parent of pair(s) none
Note

Gene hit At1g17930

 
Sequence (A. th genome BLAST matches underlined) 
>78-K014718-022-196-F10-8409
NTTTTGATCCATGATAGATTTGCCCGAACATGAAGCGATTTACAATTGAATATATCCTAC
TCCTCAGGCATTGGACATAGACATCACCTGCTTCTTCAATTGCTTCTCTCTCCTATGGGA
TCCT
GenBank Accession FR805538 [GenBank]
Graphic View Graphic view of gene At1g17930
Predicted Position of Insertion Chr1:6166717 - go to primer design
BLAST e Value 3e-14
Hit Clone Code (BAC ID) F2H15
Hit Gene Code At1g17930 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Aminotransferase-like, plant mobile domain family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g60550

 
Sequence (A. th genome BLAST matches underlined) 
>78-K014717-022-196-F10-8409
NTTTTGATCCATGTAGAATTNCCCGGGACATGAAGCATTTACAATTGAATATATCCTACT
TTCAAGCATTGGACATAGACATCACTGCTTCTTCAATTGCTTCTCTCTTCTTTGGATGTA
AATCCTCTGATGATAACGTTGAGGCCATCCTATAAGAATTGGNNGAATGTATACAGGTTG
GTCCTAAAAAGGCACAAGAAATGTGGTTTATGACGAGGTTTACCACAGCTTCTGAAGCAG
AGAAATGGGGACTTATCAATACAGTTGTACCGGTATTTNTTACCAATAAAACCCATAGTG
GenBank Accession FR805537 [GenBank]
Graphic View Graphic view of gene At1g60550
Predicted Position of Insertion Chr1:22306719 - go to primer design
BLAST e Value 3e-45
Hit Clone Code (BAC ID) F8A5
Hit Gene Code At1g60550 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation enoyl-CoA hydratase/isomerase D
Insertion Classification CDSi
Confirmation Status failed


Last Updated on 10.06.2021 13:37