SimpleSearch - Line and FST details


Line specific information

 
Line ID 200H12
Vector Used pAC161
Line Availability available as T3 set from NASC (N419200)
Segregation Analysis 100:76:56
Confirmed for Hit At4g39650
Parent of DUPLO pair none
Parent of pair(s) 9592, 68592

Gene hit At4g39650

 
Sequence (A. th genome BLAST matches underlined) 
>96-K014483-022-200-H12-8409
TTCTCTATTGATCGTAACATTTATGTCGCTCGTTCGTACTGCCACGATCGCTCTTCTTCT
AATCGCGTTTCTGCAAAACGCTAACGCTGTGAAAAATCTGCAAGTATTGTTGCGTATTAT
CTGTGCGGTTGCGACATACTATGGACGGAGTTCTGCCATAGGATCGAATGTTCTTCGTCA
AGGAGGAAACGCGATTGATGCGTCGGTGGCTGCTGCTCTTTGTTTGGGCGTTGTCAGTCC
CGCATCTATGGGATCCTCCCTTACTANNGAGANNNNNNNNNATTNNNANAAGATNNNTTG
GTTTGATTTGNNGGGGTATTGGATCCTTCCTTATTTGAGCCCCNNNANCTGAACCGCCAT
CCGTCTTTTCGCCCCCGCGAAACCGCCCCCCCTAATTTGTTTTGCCTACCCCGCCCGCTC
AGCCCGCTCCGATAAATACTCATTACCATTGCCTACGCGGCACTACCCCCCCGGCGGCCC
GTATTTCCGTGGGTACGACCCCCCAACCGCCTCCCATTTCTTTACCCCAGCCCCTGCATA
TCTCCGCCTTCCTTCTTGCGGCTGTCCCCCGTCCACCCACAAACGCAGAACTCCCCCAAT
TGGCCATTCCCGTATCCGCTTCTCTCCACTTTCCTGGTTATCGCCCCCCGCATTTACGAT
ACTCCCTACATGGCGCCCCCCGCCGCACCACCTTCCTTATTTTTCTTCCGC
GenBank Accession BX942884 [GenBank]
Graphic View Graphic view of gene At4g39650
Predicted Position of Insertion Chr4:18403697 - go to primer design
BLAST e Value 6e-105
Hit Clone Code (BAC ID) F23K16
Hit Gene Code At4g39650 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation gamma-glutamyl transpeptidase 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL760668 [GenBank]


Last Updated on 10.06.2021 13:37