SimpleSearch - Line and FST details


Line specific information

 
Line ID 201A01
Vector Used pAC161
Line Availability available as T3 set from NASC (N419201)
Segregation Analysis 100:95:70
Confirmed for Hit At4g04890
Parent of DUPLO pair none
Parent of pair(s) 5247, 5265, 5284, 5412, 5420, 10257, 10262

Gene hit At4g04890

 
Sequence (A. th genome BLAST matches underlined) 
>01-K014484-022-201-A01-8409
TTTGATCCATGTAGATTTCCCGGACTGAATCCATGACAAAAGCTTATGTTAGTCAGTGTG
AATCTTTCTAAACCCTTAAGTTACTTGAAGAACAAGTAATTACCACATCCATGAAAATCT
CAACGAGATTGATGTGATTCATTATAACAACTGCAGATTGTCTTGACGCCTCTGATCTTA
ATCCTAATGGCTTTGGTCCAATTCCTCTCGGAAACGTTCTGAAATACTCTACTTCGTTGA
GAATCTAGACTGAATTATCGGTTGAAAGCCATAAAGGATNCTCCAGTTTGAGCCATTCTC
ACGAGTTCCTCCATAGCTGCAACCGCTATGGGATCCTCCCATAGGNNGAGANNGNANNNC
CCANCCTTCTTTTCTATTTTCACTACATTAAGACAAATAACTGGTCCACCTAGTCATCGC
GAGGCCGCCCGGCGATTACCCCCTTTTGTAAAGACTTAACAGCTCCCCTTGCCTCTGAGA
CTGCTGCATACTATATTTTTGGAATA
GenBank Accession BX572215 [GenBank]
Graphic View Graphic view of gene At4g04890
Predicted Position of Insertion Chr4:2478771 - go to primer design
BLAST e Value 1e-130
Hit Clone Code (BAC ID) T1J1
Hit Gene Code At4g04890 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation protodermal factor 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX572216 [GenBank]


Last Updated on 10.06.2021 13:37