SimpleSearch - Line and FST details


Line specific information

 
Line ID 203H06
Vector Used pAC161
Line Availability available as T3 set from NASC (N419482)
Segregation Analysis 50:5:4
Confirmed for Hit At2g03480
Parent of DUPLO pair none
Parent of pair(s) 64798, 95359
Note

Gene hit At1g71040

 
Sequence (A. th genome BLAST matches underlined) 
>48-K014506-022-203-H06-8409
TTTTGATCCATGTAGATTTCCCGGACATGAAGAACTCTTCCGGTTTATAACCTGTGTCTC
GTATATCCAAAACACGTATTTAATTCTCGAAGTAGTACGTAAAATTGAAACATGAGAACG
AGACCCGAATTGGGTATACCGAGAATGACTTTACATGAATTTCAAGCCCTGCTAAGCGTT
GACCCTGCACTAGCAGACGCTGGGCTGTCTAGAAAGCCGTCGTTCACTCGCGGGTCCGCT
TATACATGGAACTCATGGGATGGTACTACGGAACGCTATCTCCATCTTTGCAAATAAGTA
TATAAGCGAGCGAGCTATGGTATCCTCCATAGGGAGAGGCCGACGGATAATGATTATGTG
CATTGTTGGCAAGAATTGCCGTTTTCGATGTTGACTTTGAAAAGTCAACGAGTACGTCGA
CAATCTCCGACGGAGCTATGGGATCCTCCCT
GenBank Accession AL760912 [GenBank]
Graphic View Graphic view of gene At1g71040
Predicted Position of Insertion Chr1:26797706 - go to primer design
BLAST e Value 2e-39
Hit Clone Code (BAC ID) F23N20
Hit Gene Code At1g71040 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cupredoxin superfamily protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 203G06

Gene hit At2g03480

 
Sequence (A. th genome BLAST matches underlined) 
>48-K014507-022-203-H06-8409
CTGATCCATGTAGACTTTCCCGGACATGAAGAATTCTTCCGGTTTTAAACCTGTATTCAG
TATATCCAAAACAACATATTAAATTCTGAAAGTATCAAGTAAAATTTAAACAATGAGAAA
GAAACAACGAAGTGGTTATCCAAAGAAATACTTTCCATGAATTTCAAGCCCGGCAGAGGT
TGTTCCTGCAACAGCAGACCTGTTCTGTATAGAAATCCAGCGTTTACTCGTGGTTCCGCT
TATACATGGAACCAATGGGTGGTAATACGGAACGCTATCTCCATCTTTGCAAAGAGGTAT
AGAAGCTTGCGAACTAGGAACTGCAACGAGACGGGTGGCAAAGATTTCGAGTAGCACTTC
ATACTACCGTGGGTTTTTTAAACCTTCCGAGTTTTGTTGATGTTATTCCGAGAATTATCA
TACCGTGTCGAAGATGCGCTTGGCAACCATCTTTTGATGGGAGTCCGGTTGTTTGAAAGC
CGGCCAAGGGTGATGAACGAAATGTGAACCCTTGTGTCGCCTA
GenBank Accession AL760913 [GenBank]
Graphic View Graphic view of gene At2g03480
Predicted Position of Insertion Chr2:1053293 - go to primer design
BLAST e Value 7e-163
Hit Clone Code (BAC ID) T4M8
Hit Gene Code At2g03480 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation QUASIMODO2 LIKE 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37