SimpleSearch - Line and FST details


Line specific information

 
Line ID 204H04
Vector Used pAC161
Line Availability available as T3 set from NASC (N419576)
Segregation Analysis 50:48:34
Confirmed for Hit At1g70960
Parent of DUPLO pair none
Parent of pair(s) 96211, 96212

Gene hit At1g70960

 
Sequence (A. th genome BLAST matches underlined) 
>32-K014508-022-204-H04-8409
NTGATCCATGTAGAATTTCCCGGACATGAANGCACTTACAATGTGAATATATACTAGTAT
ATTGGACGAACTCCATTGAATATCATTCTTTCATCTTGATTTAATATCGTTCCATATCAA
CAATGATGTCGACTGACCATTACATACTTAGTCAGGATATTCAGACGCTCTATGGGATTG
TATCTAAATACAACACAAAATGTTGTTCCCCAAACCAATAGTCTGGTGCGAAAGCAAGTT
CTTTTGTTCCAATAGTACCTTTGAAATAAAACGTCTTACCATCAACAGTTCCATTCCAAT
GAGAAATCTTAATGCTATGGGATCCTCCCTTAAGTGAGNNNCNNNNCCCCGCCCCCCCCG
CNNCCCCCNNNNNAACCCCNNCCCCGCCCCCACCCCCCCCGGACAGGGGAGCCCCCNACC
GGCCCGCGCGACCCCGGGCAGGGACACCGCGCCGGGCGGGCGGGGAAGGGCGCCGCCCCC
CCGGCGGGGGACCACCCACGGCAGCAAACACGGCCACCCGCGCCCGCCACCGCGCCCGGA
GCGGGCCCACGACGAAGAAGCACCCGGGAAAAGACGACGAGGAAAAGAGCAAGACCCCGC
ACAAGCCGGACCCGCCCGGCCAGGGAGGCGGAGAACGACGCAAGACAGGCACCACACAAA
AGAACGGCCCGGAGAGAACACAAACACGGACGCGCGGGAGACCGCGGGCGGACGTACCCC
GGGGAGACGAACGCCGCCAGCGGCGGCCGCCGACAGGAGAGGACGGCGCGCAAAACGCGA
CGCGCAAGGCGCCCAGAAGAGAGGAAGAAGC
GenBank Accession AL761019 [GenBank]
Graphic View Graphic view of gene At1g70960
Predicted Position of Insertion Chr1:26757380 - go to primer design
BLAST e Value 1e-65
Hit Clone Code (BAC ID) F15H11
Hit Gene Code At1g70960 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box and associated interaction domains-containing protein
Insertion Classification 3' region
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL761020 [GenBank]


Last Updated on 10.06.2021 13:37