SimpleSearch - Line and FST details
Line specific information
| Line ID | 205G10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N419666) |
| Segregation Analysis | 50:50:48 |
| Confirmed for Hit | At2g45930 |
| Parent of DUPLO pair | 12202 |
| Parent of pair(s) | none |
Gene hit F14D17
| Sequence (A. th genome BLAST matches underlined) | >79-K014511-022-205-G10-8409 NTGATCCATGTAGATTNTCCCGGACATGAAGCACTTTACAATTGAATATATCCATATAGT ATTCAAATGTCGTCTAGTCCCACTCCCTTGCTTCTCTTGCTATTACTTACTTGAGATTAA AAAAAAAGCGTGAGATAAGCCCATACTGAACGTTGCTCTCATGTTGCCTATGGGCTGACA TATAATATTATACCCTCATTACTTGGCCTTTGCTTAGGATTGGCCTTATATTAATCTGAT TAGAAATGTACCGTTGATATTGATTTATTTGGTAAGAATGGCTCTTATATAAAATAAAAA ATAATCTTATTAGCTGGACAGGTGGCCTTTTTGGGATATTTCTTCTTACATTGTCAATTA TATCAATATATGGCTCTGCGCTTAGAATCCAAGTCTACCAAAATTACGCCTTATTTCTCA CACCCGTTTACTATATTGATCGTACTCACAGGTCCTATGGGATCCTCCCTAAATTGAGTN AGGACTTGAGATCCATTTCTTTAGGCCTTGTGGCCAAACTGACCACTACTCGGTTTAGGC TTTAAAACCGAATCCCCCTTCTTTGATC |
| GenBank Accession | FR805735 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:16430711 - go to primer design |
| BLAST e Value | 1e-59 |
| Hit Clone Code (BAC ID) | F14D17 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At2g45930
| Sequence (A. th genome BLAST matches underlined) | >79-K014511-022-205-G10-8409 NTGATCCATGTAGATTNTCCCGGACATGAAGCACTTTACAATTGAATATATCCATATAGT ATTCAAATGTCGTCTAGTCCCACTCCCTTGCTTCTCTTGCTATTACTTACTTGAGATTAA AAAAAAAGCGTGAGATAAGCCCATACTGAACGTTGCTCTCATGTTGCCTATGGGCTGACA TATAATATTATACCCTCATTACTTGGCCTTTGCTTAGGATTGGCCTTATATTAATCTGAT TAGAAATGTACCGTTGATATTGATTTATTTGGTAAGAATGGCTCTTATATAAAATAAAAA ATAATCTTATTAGCTGGACAGGTGGCCTTTTTGGGATATTTCTTCTTACATTGTCAATTA TATCAATATATGGCTCTGCGCTTAGAATCCAAGTCTACCAAAATTACGCCTTATTTCTCA CACCCGTTTACTATATTGATCGTACTCACAGGTCCTATGGGATCCTCCCTAAATTGAGTN AGGACTTGAGATCCATTTCTTTAGGCCTTGTGGCCAAACTGACCACTACTCGGTTTAGGC TTTAAAACCGAATCCCCCTTCTTTGATC |
| GenBank Accession | FR805735 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:18902583 - go to primer design |
| BLAST e Value | 1e-28 |
| Hit Clone Code (BAC ID) | F4I18 |
| Hit Gene Code | At2g45930 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | hypothetical protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T1N15
| Sequence (A. th genome BLAST matches underlined) | >79-K014510-022-205-G10-8409 TTGATCCATGTAGATTNTCCCGCACATGAAGCACTTTACAATTGAATATATCAATTGAAT ATTCCAAAACAATCTGGCCAGATATCTATGGGATCCTCCCTATAGTGAGACGGACCGAAC |
| GenBank Accession | AL761131 [GenBank] |
| Graphic View |
|
| Predicted Position of Insertion | Chr1:17944977 - go to primer design |
| BLAST e Value | 4e-04 |
| Hit Clone Code (BAC ID) | T1N15 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
