SimpleSearch - Line and FST details


Line specific information

 
Line ID 205H07
Vector Used pAC161
Line Availability available as T3 set from NASC (N419675)
Segregation Analysis 50:34:18
Confirmed for Hit At2g42270
Parent of DUPLO pair none
Parent of pair(s) 12020

Gene hit At2g42270

 
Sequence (A. th genome BLAST matches underlined) 
>56-K014511-022-205-H07-8409
NTGATCCATGTAGAATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGTAATT
ATTGAATAGCCGTGTGTATTTTGGGAATTGGCTCAGAGATTGGTACAGTGAAGTTCAAAG
TGTGGTCCTCATCAATAACCCGTTTTTTAAAAAGAAAGTACTCATGATGAAGGATCTTTT
CACCATCATTGTCTTCCACAATTATCCAAAACGGTTCAACATATTTATTTGCTTTGTCAT
CCCAGTGGAAATCAGGTGTCACCGTGAGCTCAACCTGCAGAACAGAACGAGAAATCGGCT
GAACATGTGCTGCAAGTTTCAGTTTTGGGAACTGATGGATATACTTGTGAAGTGGTCTGC
CCATCTTAGGATTACAAATAAGCTCTCTTATGGGATCCTCCTTAGGGGGAGAGGANCNNN
NNNCCGATTGGGACAAAAAGCTCGGAAAGGGGCTCGGGTTTACGGGTCGCCGAGTTAACA
GGGGAGACATTATCGGATCTTA
GenBank Accession AL761144 [GenBank]
Graphic View Graphic view of gene At2g42270
Predicted Position of Insertion Chr2:17608217 - go to primer design
BLAST e Value 8e-172
Hit Clone Code (BAC ID) T24P15
Hit Gene Code At2g42270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation U5 small nuclear ribonucleoprotein helicase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL761144 [GenBank]


Last Updated on 10.06.2021 13:37