SimpleSearch - Line and FST details


Line specific information

 
Line ID 206D06
Vector Used pAC161
Line Availability available as T3 set from NASC (N419722)
Segregation Analysis 50:15:12
Confirmed for Hit At2g35770
Parent of DUPLO pair none
Parent of pair(s) 6131, 6211, 7759, 7762, 10554, 73725, 73730
Note

Gene hit At2g23780

 
Sequence (A. th genome BLAST matches underlined) 
>44-K014512-022-206-D06-8409
NTGATCCATGGTAGATTTCCCGGACATTGAAGCCTTTACAATTGAATATATCCTGTAAAT
CCCTAAAAAGAGAGATTTGGACGAAACACTAAGAGGAAACCACACTTCTTGGGAAAAAAC
AGATTCTTACTGTTGTTGGGAAAGAAAGTTCCAGGCTATATCTGACTTTTAGTTTTTCTC
GTTTTTTTTCCATATATTGTCTTTGGAAGTTTTGATTAATTATTGGGCCGATTATATTAA
TTCCTAAACTGATATTGGGCCTGATTAGCTACAACAACACATTTTGGTAGATAAAATGAT
GCCAAAAGCTCGTTTTAAACGTAAGCTATGGGATCCTCCCTTAACAGAGATCTATGGGAT
CCTCC
GenBank Accession AL761191 [GenBank]
Graphic View Graphic view of gene At2g23780
Predicted Position of Insertion Chr2:10124536 - go to primer design
BLAST e Value 1e-108
Hit Clone Code (BAC ID) F27L4
Hit Gene Code At2g23780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status failed

Gene hit At2g35770

 
Sequence (A. th genome BLAST matches underlined) 
>44-K014513-022-206-D06-8409
NTGATCCATGTATGATTTCCCGGACGTGATAGCCTTTTCTTTTGAAGCCTTTGTCTCATC
CTCTTCTCGCTCTTTTCCTCTTCACCCACTTCCTAACCAACCACTCTCTTCCCTCCTCTC
CCTCTTAATTTTTTTTCCACTTATTTGCATGAGGCACATTTTCGAAACATCATTATTTGC
GTTTTTTATCGATAGGTGGCATTTGTTTCTGTTTTGTGTGTAGTTGTTACGTATTAGAAG
ACAAATATACGTCTTTTTCTTTTAATATTAATTAAAAATAAAGTCGTACATGGAGATCAA
ACTTGATTGGCTGAAAATGTTTTCCAAACCTCTTAGCTCATAAACAAATCCCTATGGGAT
CCTCCCTA
GenBank Accession AL761192 [GenBank]
Graphic View Graphic view of gene At2g35770
Predicted Position of Insertion Chr2:15034256 - go to primer design
BLAST e Value 3e-128
Hit Clone Code (BAC ID) T20F21
Hit Gene Code At2g35770 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation serine carboxypeptidase-like 28
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37