SimpleSearch - Line and FST details


Line specific information

 
Line ID 206F05
Vector Used pAC161
Line Availability available as T3 set from NASC (N419745)
Segregation Analysis 58:23:17
Confirmed for Hit At3g25420
Parent of DUPLO pair none
Parent of pair(s) 6869

Gene hit At3g25420

 
Sequence (A. th genome BLAST matches underlined) 
>38-K014513-022-206-F05-8409
NTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATACACACATCCA
AGTCAAATGTAGACATGACATGGGAACTATTTAAAATTGGTTATTTGTATCCCATTGCCT
TAGTCCATGCTTCAGAGCCAGTATATGGTACACACATATCATGATCTCCACTGCAAAAAA
TTTAACTTTTGTTATATTTTATATTTTCATTCGTTTTACTTTTAGTTACCTTTGATTTAT
TTCTATATATGTGCACCTGAAAATGAGAGCTCGAAAGCCACTAAGAGTGAGGTTTCTATG
GTATTCGATCATGCTACCGGTGTCGTGCCTATATTCGAGGTTGCTTGAACATAACTCCCA
ATTTCCAATCGCTTTTTCCTATATTGACGTTTCGAAAAAAGGTCCAAGATGTTCAAATGG
TGTCCAATGTCCATCATCAACTTATTACAAATACTTGATTGAGAGAAATATGATGAATTG
AATAGAGACCTCTTTAGCATGAACCGGTTTCCTTACAGCTGGATCAGTTACCCATTTGGT
CGCGACTG
GenBank Accession AL761223 [GenBank]
Graphic View Graphic view of gene At3g25420
Predicted Position of Insertion Chr3:9220536 - go to primer design
BLAST e Value 4e-146
Hit Clone Code (BAC ID) MWL2
Hit Gene Code At3g25420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation serine carboxypeptidase-like 21
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g32590

 
Sequence (A. th genome BLAST matches underlined) 
>38-K014512-022-206-F05-8409
TTGATCCATTGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCATATAGC
AGACCGCTAAGCGTTGATATTGGATACCTACCTATAAAGAGTGAAATATCCATGGCCGGT
CATAGGACTGATAGATTGGGTTAAGACTTGGTTAAGAGTTAACCGATATATAACAAATGA
ATTTTGTTTCGCCAACGCTAATTGTACTATTAACGGAAAACAATCTTGTCAAAATGGTAC
ATACGAAAAGCAGATACAAGAAACTCAAAGAACGTATCTAGTATTAGGACTATGATATAA
GTAATTCCTGACATCTATGGGATCC
GenBank Accession AL761222 [GenBank]
Graphic View Graphic view of gene At2g32590
Predicted Position of Insertion Chr2:13833418 - go to primer design
BLAST e Value 5e-90
Hit Clone Code (BAC ID) T26B15
Hit Gene Code At2g32590 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation condensin complex subunit
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37