SimpleSearch - Line and FST details


Line specific information

 
Line ID 206F10
Vector Used pAC161
Line Availability available as T3 set from NASC (N419750)
Segregation Analysis 50:47:28
Confirmed for Hit At1g15400
Parent of DUPLO pair 2493
Parent of pair(s) none

Gene hit At1g15400

 
Sequence (A. th genome BLAST matches underlined) 
>08-K119005-0022-206-F10C-8409
TTACATTGAATATGGATCATATTGAATGATCCATATTAATCATCATACTCAGGATATTCA
ATTGCTCATTGCGGATTAACGATATCATTCAACCGNGATTATTCAAACATTAATTGTAAT
AAAAAAAAAAAAGTAAAACCCTTTCCGGTTTTGGATGATTAGGGCAAAAAATTCCAGGTA
AATTTTTGGTTGGTTTCCCCACCTTAAACCGGATTCCCAACCCCACATGGGCACATAAGC
CCCCTTATACCCATATTGGTTATTTTATCCCAAACTTTGGGTTTCTTTAAACTCAAAGGG
GGAAAAACTTTTTGAAATTCCTATGGTTTTACCACCAATTTGCAGGGATTAGATAATAGA
TTAAAATTGAACGGGAAATTTGCCTTATGGGACCCCCTAATTTAATTTTCCCTTCTCCCC
CATTTCGGAAAACCAAAAAAACTATTTCCTTCTTCCCCATTTCGGAAAACCAAATCTTTT
AGGGGAGGATGTTATTAAAAGGCCAAATCTCTCTTTATAAAACCTTGAAGGGAAAACCAA
TCCAAGGGGGGGAAAGTGAGTCAAAGTATTTCGGTTCCCATTTTGTATTCAAAGCCAACA
TCATGGAACTAAAATAGGGTATAACTTTTGTTCAATAATCCACCTTCTTATACCGTCGGT
TTCTCCCCAGGATCCC
GenBank Accession LN713402 [GenBank]
Graphic View Graphic view of gene At1g15400
Predicted Position of Insertion Chr1:5297056 - go to primer design
BLAST e Value 1e-163
Hit Clone Code (BAC ID) F9L1
Hit Gene Code At1g15400 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL761230 [GenBank] AL761230 [GenBank]


Last Updated on 10.06.2021 13:37