SimpleSearch - Line and FST details


Line specific information

 
Line ID 208B06
Vector Used pAC161
Line Availability available as T3 set from NASC (N419890)
Segregation Analysis 50:49:42
Confirmed for Hit At3g61172
Parent of DUPLO pair none
Parent of pair(s) 89431, 89441, 89466, 89468, 89472

Gene hit F9D24

 
Sequence (A. th genome BLAST matches underlined) 
>42-K014551-022-208-B06-8409
TGATCCATGTAGATTTCCCGGACTGAAGCCTTTACAAGGATCCCTGGTAATACCATGGTT
GGGGAAACTTTGATTCTTTATAGTATGCATTAAATATATACGCATTATTTACTCTATGGG
ATCCTCCTACTATTGAGATGTTCTGCTTCCATTCATCGATTTCTTCTATGGGATCCTCCC
TATACTGAGTCG
GenBank Accession FR805770 [GenBank]
Graphic View Graphic view of sequence FR805770 of line 208B06
Predicted Position of Insertion Chr3:21597566 - go to primer design
BLAST e Value 2e-09
Hit Clone Code (BAC ID) F9D24
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At3g61172

 
Sequence (A. th genome BLAST matches underlined) 
>42-K014554-022-208-B06-8409
NTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATTGCTGGCCAGTTC
CTTGCAACTGCTTGTACAGAGACTTGTGCATGTGGCTCCATACAATTGTTGTTTAACAGA
ATCTGATGACATATATGTTGTCCTTGCGTTTCTTTCGCCATCATCCCTAAAACAATATTT
TTAAACATCAAATTTCAATATACAAAGCATAAAAACGTGAAAATTTATTTGATTAATTTG
TTAATGGTCATTTATAATATAGTTAGAGAATGGAAATGTAAAACAAACCTATGGGATCCT
GenBank Accession AL766149 [GenBank]
Graphic View Graphic view of gene At3g61172
Predicted Position of Insertion Chr3:22641824 - go to primer design
BLAST e Value 7e-126
Hit Clone Code (BAC ID) T20K12
Hit Gene Code At3g61172 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation low-molecular-weight cysteine-rich 8
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37