SimpleSearch - Line and FST details


Line specific information

 
Line ID 208H08
Vector Used pAC161
Line Availability available as T3 set from NASC (N419964)
Segregation Analysis 50:44:24
Confirmed for Hit At1g30900
Parent of DUPLO pair none
Parent of pair(s) 300, 2904, 84526, 84527, 84528, 84529

Gene hit At1g30900

 
Sequence (A. th genome BLAST matches underlined) 
>64-K014554-022-208-H08-8409
AATTTGATCCATGTAGACTTCCCTGGACATGAAGCCTTTACAATTGAATTGGGCTGACAA
GCTGTTTAAGAAAACATGATGAGAGATTTTGAATCCTATGGGATCCTCCCTATAGTGAGA
ACGCATAAGTGCTTGAGTAAATAATTGGCACTTGTATAGTAAAAATTCCTATGGGATCCT
GCCTCATAAAGAGAAAATGGGGGGACTCTCCTCGTTTTTTTTTATTTGAACGAAAATCCA
GAGTGGGAGACGGCCAACCCCATTACAGGTGGGGCCGTTTAATGAGCCTCGGCGTTTTGT
AGGATCACAATTTTTCCTGGGTACTGAACCAATCCTTTGTAATATTTTGAAAACGAAGGG
ATTTTCCCATTTAGGACACNCCGTTTGGAGAGATTNGGTTTGGAAGATCCCCCTTAGGGA
TTCACCTTAATTTGAGGGGCTCTCCTAACGTGGGCCACACAACAATTATTCATTTACACG
CCCGTTTTTATTTTCCACCCGATCCGGATTTATCCATTACCCGTACCCCCATCCCCCTTC
CGTTGGTCCAGGGGCATCCGACCTCCCTCGCCCCAGTATTATCCCCACTTCGTTATTTTG
TTGAATGGTACACAATGATAGAAAACGAACCCCCCCACCCCTAAAATCCGCGGGGACCCC
GCCTATAAAAATGTTTTCCTACGGCAGGATTAAAAAGAGGCCCAGAGGTACTGTTAGTCC
CGCCCCTCCGCGTACCCCCGATAGACCATACCGCTCTTTGTGAATAAATCCGCTCAACCC
TTCCCCCCCAACCACAACCCGTCACTCTCTGCCCCCGGACACCAACACATCGCCGTATCA
TAATCCTCGCCCGGCATTCCAT
GenBank Accession FR805782 [GenBank]
Graphic View Graphic view of gene At1g30900
Predicted Position of Insertion Chr1:10999967 - go to primer design
BLAST e Value 3e-08
Hit Clone Code (BAC ID) F17F8
Hit Gene Code At1g30900 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation VACUOLAR SORTING RECEPTOR 6
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR805782 [GenBank]


Last Updated on 10.06.2021 13:37