SimpleSearch - Line and FST details


Line specific information

 
Line ID 212A03
Vector Used pAC161
Line Availability available as T3 set from NASC (N420259)
Segregation Analysis 50:40:37
Confirmed for Hit At2g13500
Parent of DUPLO pair none
Parent of pair(s) 3213, 11136, 62121, 94066, 94068, 94069

Gene hit At2g13500

 
Sequence (A. th genome BLAST matches underlined) 
>17-K014133-022-212-A03-8409
NTTTGATCCATGTAGATCTTCCCGGACATGAANGCCTGTACATTCTTGTTGGCACTCGTG
GAGGTGGATGTAAAGGAACCTGAAGAGAGCTATCAGTCATCTGAGATTGAGAGTTAAAGC
TTGACCTCAAAACACTATCTCTGAAAACAGCTCTTTCCCTGTCAATGCTCTGAAAACGTT
GGCGATAAGGATAATAGTTCAAGTTATGGGTAAACCTAAAACAACTATAGATGCGCCTAA
GTCTCTCATACTGAAACCGAATTAAAGCCGTTTCTCCTGACTCAAAGGTGATTCTCTGAA
AGAACCTTAAACGATCAGTAATACCAAAACGAACTCTAACTCGGATATAAGCAATCTGTG
TAGAAGTGGCATCATGAAAGTCCAAAGATATAATCTCCCCAAGCTCTTGAGCAATCTCTA
TGGGATCCTCC
GenBank Accession AL766580 [GenBank]
Graphic View Graphic view of gene At2g13500
Predicted Position of Insertion Chr2:5628730 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T10F5
Hit Gene Code At2g13500 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ta11-like non-LTR retrotransposon
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37