SimpleSearch - Line and FST details
Line specific information
| Line ID | 213D06 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N420394) |
| Segregation Analysis | 50:21:19 |
| Confirmed for Hit | At4g35460 |
| Parent of DUPLO pair | 11770, 12479 |
| Parent of pair(s) | none |
| Note |
Gene hit At4g35460
| Sequence (A. th genome BLAST matches underlined) | >44-K014138-022-213-D06-8409 NTGATCCATGTAGATTTCCCGGACCATGAAGCACTTACAATTGAATATATCCTGTGACCC TATGGCTTGTCAAGTTCTTGAGGTTTAGTTGCTTCTATATCATGTGATTCAATTCACAAT TGATGCAAGCCTATGGGATCCTCCCTATAGTGAG |
| GenBank Accession | AL766741 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:16843410 - go to primer design |
| BLAST e Value | 9e-39 |
| Hit Clone Code (BAC ID) | F15J1 |
| Hit Gene Code | At4g35460 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | NADPH-dependent thioredoxin reductase B |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g09600
| Sequence (A. th genome BLAST matches underlined) | >44-K014134-022-213-D06-8409 TTTTTGATCCATGTAGATGTTCCCGGACATGAANGCCTTTACAATTGAATATTTCCCGGA CTCCATAGTCAACTAGTTCTATGGGATCCTCCCTATCGGGATGTTCTCGATCTATCATTA ATACCTCCAAACTGACGCACTCAACGAGAGTGAAAAACATACTGATTTGTAAACGGACAG AGGCGCGGAGACGACGTCTCGTGGGCGAATCGATCGGATTAGAGCCGGGGCTGCCATGGA CTGAATCGGATGAGAGTTCTCTGCTATTGATCTTGCTGCGTAAATTCGAGAGAAGTAAGC CAACAAAAGAAATGGGATCTCGATTAAATCAGCCCTAATTATTTCATAAAAATTAAAATA AATTAGAGGTTAATTGCGTAAATTACAAATTCCCCAACGAAAGTTATCCGCACGTTTCAC AATGAGATTATCGAAACCTCTGGCTCCTTTAGCGGGTCTCTCCGGTGAGTGCTACAAACA AGTCAAGTGATAAAAACTTCGGAACCACTGTAGTGGTTGTAGTTGTTCCGTATAAGTTTT GGCGTGGTGGTGGGTTCCAAAGAATAAGACCCAAACAATGAGCTATGGGATCCTC |
| GenBank Accession | AL766740 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:2979398 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F17I14 |
| Hit Gene Code | At5g09600 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | succinate dehydrogenase 3-1 |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
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