SimpleSearch - Line and FST details


Line specific information

 
Line ID 215A11
Vector Used pAC161
Line Availability available as T3 set from NASC (N420555)
Segregation Analysis 50:49:38
Confirmed for Hit At3g22000
Parent of DUPLO pair none
Parent of pair(s) 85891, 85907, 85922, 85938, 85939, 85940, 85942, 85947, 85948

Gene hit At3g22000

 
Sequence (A. th genome BLAST matches underlined) 
>81-K014140-022-215-A11-8409
TTGATCCATGTAGATTNTCCCGGACATGAAGACCTTTACAATTGAATATTTGCTGCTTTC
TATCTTAAGGCGTTTGCAGATCTGTCCATACCACGAACCAATACACTGACCTATAGGAAA
CATTCCCGTTAGTGGCTAAAATAACATTTACTATGATAATGAACGAGAGTAATTAATGTT
ACCCCGGAGATGCCGGCAGCATAGCAAGAGCGGCACTTAAAATTATAGGAGTCACCGCTG
CACTGGTAGAGAATGGTTACAGCATTGGGTTTTAGACCGCTATGGGATCCTCCCTATAGT
GAGTATCAACAGCCCAAAA
GenBank Accession AL766954 [GenBank]
Graphic View Graphic view of gene At3g22000
Predicted Position of Insertion Chr3:7752307 - go to primer design
BLAST e Value 3e-60
Hit Clone Code (BAC ID) MZN24
Hit Gene Code At3g22000 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cysteine-rich repeat secretory protein, putative (DUF26)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL766954 [GenBank]


Last Updated on 10.06.2021 13:37