SimpleSearch - Line and FST details


Line specific information

 
Line ID 215C08
Vector Used pAC161
Line Availability available as T3 set from NASC (N420576)
Segregation Analysis 50:39:27
Confirmed for Hit At5g65140
Parent of DUPLO pair none
Parent of pair(s) 1760, 5682, 5693, 5699, 8703, 10412, 93666, 93670, 93673

Gene hit At5g65140

 
Sequence (A. th genome BLAST matches underlined) 
>59-K014140-022-215-C08-8409
TTTGATCCATGTAGATTTCCCGGACATGAAGCACTTTACATTGAATATTCTCGTGATAAA
CAGAGGAACGGAACTGGCTTTTCTACCTACTTGTTTTAATCCTGAATAGATACTGAACCT
GTCTATAATCAGATACATACTGAGATGATATACATACTAAGATGATAACACAGATTTATT
TACCTCATCGATCTTGGGACCAAAGTCACCGTGGTGGTTGGAGAAGACCGGTGGGTGGAT
CCTAACGGCCGGATGTATCCTTTTGCTAAGAGAAACTTCTTGTCTAAAGAAAATCCGGAT
CGAAATACTCTAACCATGGGAATTCTATAGCCTTCCTTATTGTATATTGAGACTCCTTGA
ATTGGGCCTTTACTATCCATGCGATGGCTTTCAGCATACTACGGCTCTGCT
GenBank Accession AL766980 [GenBank]
Graphic View Graphic view of gene At5g65140
Predicted Position of Insertion Chr5:26020913 - go to primer design
BLAST e Value 5e-22
Hit Clone Code (BAC ID) MQN23
Hit Gene Code At5g65140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL766980 [GenBank]


Last Updated on 10.06.2021 13:37