SimpleSearch - Line and FST details


Line specific information

 
Line ID 215D03
Vector Used pAC161
Line Availability available as T3 set from NASC (N420583)
Segregation Analysis 50:43:39
Confirmed for Hit At1g77220
Parent of DUPLO pair 2328
Parent of pair(s) none

Gene hit At1g06720

 
Sequence (A. th genome BLAST matches underlined) 
>20-K014140-022-215-D03-8409
AAGGATCCATGTAGATTTCCCTGGACTGANNGCCTTTACANNTTGATATTACATTGCTGA
GCCTTTTTCTTGTGCCCATTTTACTACAATCCTGCTATTGACGCTATGGGATCCTCCCTA
TAGTGAGATTTATGCTGCATGATAGTATGAGGCTTTTAGTTTTAAAACATTACCGGGGGA
TGTTAAACCAATTGGAATGGCTGGATGATAGAATGCTTTTTTCTTTTTTTGGGTCCCATT
ATAACGGCTTTTTTATCCTTTATGGGATCCTC
GenBank Accession AL766990 [GenBank]
Graphic View Graphic view of gene At1g06720
Predicted Position of Insertion Chr1:2060756 - go to primer design
BLAST e Value 3e-14
Hit Clone Code (BAC ID) F4H5
Hit Gene Code At1g06720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation P-loop containing nucleoside triphosphate hydrolases superfamily protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g77220

 
Sequence (A. th genome BLAST matches underlined) 
>20-K014144-022-215-D03-8409
TTTGATCCATGTAGATTTCCCTTACATGAANGCCTTTACAATTGCTGTTTATCGCCGGGA
GGCGGTCGGCTTATGGGATTACTTCTACTTTAGTCCTGTATTTGTAGTGAAATTTCCATT
AAGATTTGTGTTCAGATATTTTTCTAATTCGGGGTTTCTTATAATTTCCGAGCAGTTTTT
GTCTTTGGTGAATTCAGAAGCAGCTTTCAACTGCGAGGTGATTAGAGATTGTTATGAAGC
TTTTGCACTCTATTGTTTCGAGAGATATTTGATAGCTTGCCTATGGGATCCTCCCTTTAG
GGGAG
GenBank Accession AL766991 [GenBank]
Graphic View Graphic view of gene At1g77220
Predicted Position of Insertion Chr1:29013674 - go to primer design
BLAST e Value 1e-105
Hit Clone Code (BAC ID) T14N5
Hit Gene Code At1g77220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation organic solute transporter ostalpha protein (DUF300)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37