SimpleSearch - Line and FST details


Line specific information

 
Line ID 215E10
Vector Used pAC161
Line Availability available as T3 set from NASC (N420602)
Segregation Analysis 50:48:37
Confirmed for Hit At3g53500
Parent of DUPLO pair 2284
Parent of pair(s) none

Gene hit At3g53500

 
Sequence (A. th genome BLAST matches underlined) 
>77-K014140-022-215-E10-8409
NTTTGATCCATGTAGACTTTCCCGTACATGAANGCACTTTCCCGACATGCTGATCCAGTC
TATTAATTGTTGCCGGGAAGCTATGGGATCCTCCCTATAGTGAGTATAAATTTATAGGGC
CGGCCTTCCAAAAACACCAATTGAAATAGAAACCAACCAAAATGGAAATTGGGGTAGTTT
TTTTTACCACTAAAAATGGATCCTTCCTTATGCCCAGGACCTTATATAAAAGATTTTTTA
TCTCCAAGTGTGTGTCCTTTTAACCAACCAACCAAAAGAAAAATTCATTTTTGAAAGTCA
CAAAACTTTTCAAACCTTCAAATTTATGGAACAAAGCTTTGGGATCCTCCCTAAGGGGAG
GCAGANGCCCACCTCCTGCTTCTGCCCGCTGCTTTAATTGTGCGCGCAATGGCCACTGCG
CCCGATATTGTACAGCACGACACTGTAATAATCACTGTCACCGCTGTGGCCAAAGAGGAC
CCATTGAGACAAACTGCCAAAACAGT
GenBank Accession FR805888 [GenBank]
Graphic View Graphic view of gene At3g53500
Predicted Position of Insertion Chr3:19835837 - go to primer design
BLAST e Value 2e-15
Hit Clone Code (BAC ID) F4P12
Hit Gene Code At3g53500 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR805888 [GenBank]


Last Updated on 10.06.2021 13:37