SimpleSearch - Line and FST details


Line specific information

 
Line ID 215E11
Vector Used pAC161
Line Availability available as T3 set from NASC (N420603)
Segregation Analysis 50:27:27
Confirmed for Hit At5g11100
Parent of DUPLO pair 2613
Parent of pair(s) none

Gene hit At5g11100

 
Sequence (A. th genome BLAST matches underlined) 
>85-K014144-022-215-E11-8409
NATTGATCCATGTAGATCTTCCCGTGACATGAAGCACTTACAATTGAATATATCCAAAAT
CCCCCCTAATTCCGGGTTTTCTTTTTATAACAAGTATTAATTTGGACTTGGTTCCCACTT
ATGTTTCTTGCTTTTTTTTTGCCACCACTTATGTCTCTTTTTTATAATCCTAAACTTTAC
ATATGTGTTTAGAAATGTCCCACCTATGGGATCCTCCCTATAGGGAGATGAGAAAACACA
ACCCAAGAAGGATAAAAATCTCCCGGGAGAAGTTTTCTCGAATCTTGAACTGTCATTCTT
GCAAATGCAGCAATGGTCTTTGCCTATTCAAAACCAAAAAATTGGTCTTCTTATTTATTA
ATCTTCTTAGATGGATTAATCACAATACGAAAATATGAAATTGGTTTTACCAAATCAGCT
CGACGAGTGGATCTGACACTATGGGATCCTCCCTA
GenBank Accession AL767012 [GenBank]
Graphic View Graphic view of gene At5g11100
Predicted Position of Insertion Chr5:3532858 - go to primer design
BLAST e Value 2e-114
Hit Clone Code (BAC ID) T5K6
Hit Gene Code At5g11100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Calcium-dependent lipid-binding (CaLB domain) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL767011 [GenBank]


Last Updated on 10.06.2021 13:37