SimpleSearch - Line and FST details
Line specific information
Line ID | 217A12 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N420748) |
Segregation Analysis | 50:16:12 |
Confirmed for Hit | At5g01160 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At5g01160
Sequence (A. th genome BLAST matches underlined) | >89-K014142-022-217-A12-8409 TGATCCATGTAGATTTCCCGGACATGAAGCACTGGCTATATTGATTGGCCTTAAAGAGTT TTTTTAAGGGGGCTCTTCTTCTATATGTGATTGAAACTTTTTTTGTTTTGTTTTGGTTTT GCAGATTCCTTGTGATCATGCCTTTTGCCTTGAATGTGCTCGCAGTGATTCCATCTGCTA TCTGTAACCATCTTTAACTCTCATCGAATTTCATTAGAAGCTTTGATAGAGATACTTTAG ATTGTTTGGTAATCTACAGAGACGCAGGATTATCATAGTTTGAGCTATGGGATC |
GenBank Accession | AL767170 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:54591 - go to primer design |
BLAST e Value | 2e-86 |
Hit Clone Code (BAC ID) | F7J8 |
Hit Gene Code | At5g01160 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | RING/U-box superfamily protein |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |