SimpleSearch - Line and FST details
Line specific information
| Line ID | 217D03 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N420775) |
| Segregation Analysis | 50:29:24 |
| Confirmed for Hit | At3g03060 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 725, 3444, 3529 |
Gene hit At2g30680
| Sequence (A. th genome BLAST matches underlined) | >20-K014146-022-217-D03-8409 TTGATCATGTAGATTTCCCGGAATGAAGCATTTACATTGAATATGTAGATAAAAATTAGA AAACCCTCCCTCTGCAAACCCTATGGATCCTCCTATAGTGAGANNNNNNNNNNNNNNNNN NNNNNNNNNTTTNTNTNNNNNNNNNNGNGGNCNNNNCNTNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNGTTTTTTTT TTCCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT NTTTGTTTTTTCCCTTTTCCCTTTCCCCCTCCCCTCCCTTCCCCCCCTNTTCCCCCCCCC GCGCCGCTGTCTGCGGCGCCGGGCGGGGGCCGCCGTTTGGGTCCGGCGCGCCGCGGGGCG CCCGGCTCGCCCCGCCGTTCCCGCCCCCCCGTCCCCGCCCCTGTCCCCCCCTTTCTTCCC CCCCCCCCGCCCCCCCTTGGTCCCCCCCTTTTCCGCCCCGCCCCCCCTTCGTCCCCTCTT GTTGCCTCCCCTCCCGGCTCGCTCCCCCCCGCCCCCCCTATTCCCTCGTCCCCGTTTTCG CGCCGGCCCCCTTCTCCCCCACCCTTTCCTCTCGCCCCCCCGCCCGCGGTCCTCTCTCTT CCCTCCGAATGCACCGCCCAACTAACCACACCGCGAACCCGCCCCCATTGGAACCCGCCC CTAGGCCATAGCCCGCCGGGCCCGTACATCCATTCTCTCCATCCATCT |
| GenBank Accession | AL767205 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:13073621 - go to primer design |
| BLAST e Value | 4e-04 |
| Hit Clone Code (BAC ID) | T11J7 |
| Hit Gene Code | At2g30680 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | callose synthase-like protein |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
Gene hit At3g03060
| Sequence (A. th genome BLAST matches underlined) | >20-K014142-022-217-D03-8409 CTGATCCATGTAGATTNTCCCGGACTGAAGCACTTTACAATTGAATATGTAGATCATAGA AAGCTTATGAAAAACCCTACCTCTGCAAACCCTAGTGATGTATCAACTTTACTAAGATAA CACCATAATCGTTATGCCACAGTTGCTAACTCATTTCTATTAGGTAGCCATTAACTGTTA ACTCACTTGTCCATGAATATATAAACACGACATCCAAATATTGGTTAAGAAACTTAAAGT TAGATGATCTCACAGTTTCAGCTTGGGCTTGCATAGCTTTAAACTCTTGCGCCTTCGTTG CAAACTCAGTTTGCTTTGTCTCTTCTTGCTGCTTAATACTTTCAAAAACCTACCAGAACC AAATACACAACAACTGTGAGCTTAACCACGATTGATAAACAAACAGAAATAGAACAATTC TGAGATCCAACACAGATGCTACCATTTTCAATCACTTTTAGGCTCATCATACAAATTATC ACCTAATTGAAACCTTCTTCTGTAGCCTTTCCTAAACCTAAGCATGATTCGATTTCACAA AATTCCTAACTATAGAAAGACACAACAAGGTCCAAGACCTTTTTCGCGTACGAGGAATGG GGTATCTCTTTCAAGGCCTTAGC |
| GenBank Accession | AL767204 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:693003 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T17B22 |
| Hit Gene Code | At3g03060 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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