SimpleSearch - Line and FST details


Line specific information

 
Line ID 217H10
Vector Used pAC161
Line Availability available as T3 set from NASC (N420830)
Segregation Analysis 50:36:25
Confirmed for Hit At3g62820
Parent of DUPLO pair none
Parent of pair(s) 6896

Gene hit At3g62820

 
Sequence (A. th genome BLAST matches underlined) 
>80-K014142-022-217-H10-8409
ACCTTGATCCATGTAGATCTTCCCGTGACATGAAGCCGTTACACGCTACCAAGACCTCTG
CGCTAAAACGCTATTGCCGTTTGCATCAGTCGCCAAGAACAGTCCCAGCAAATGGGCACG
TGCCGGCGTTTCCGTTGCCATAACCGACAACAAAGACGTCCTTAGACACCTTCTCAAAAC
GAGGCTTTCAACGATTGGGAAACGAGACCGAATCGCTTTGTCTGATTGTCGCGAACTTCT
CCAAGACTCTCTTGATAGTCTCCACAAGTCCTTGGCCGTCCTCCGGACACTCAGAGCCAG
CGAGTTTCAGCAGCAGATGAGTGATCTTGCTACGTGGCTTAGCTCCTCACTGACAAGGAC
ACGTGTCTTGATGGGTTTGAAAAGACATCGACGAGGTCATCATCAACGGTCAGGATGATT
CGGAAGAGAGTCACGACGTCTATGTACTTGTCCAGCAATTCTCTCGCACTCCTCAACAAG
CTATGGGAT
GenBank Accession AL767275 [GenBank]
Graphic View Graphic view of gene At3g62820
Predicted Position of Insertion Chr3:23229899 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F26K9
Hit Gene Code At3g62820 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Plant invertase/pectin methylesterase inhibitor superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g31540

 
Sequence (A. th genome BLAST matches underlined) 
>80-K014146-022-217-H10-8409
NATTGATCCATGTAGATCTTCCCGTGACATGAAGCCTTTACAATTGAATATATTAAACTG
ATCAGAGCGAAGAGCAGTGACAGTGATGAAGAGCATGACTTACTTTGTAGCCACACCTGC
AAAGTTTTTAGGCATCTTTCAAAGTCCATAAACCAACTTAGGCTATTTCCGAATAAACTA
TATAACACAAATTGTTTCAAATGCAAGTCGTGTTGTGGATACAAAAAAACTGATGGAATT
TTACGCAAACGGGTATAAGATTAAAAGGATTTGGTATAAGATTCTATGAAGATAGTAATG
AAGAGAGATAATTAGTTGGTCCAAAATTTTTTTTTGCTTGTGGCCACCAAATCCCTATGG
GATCCTCC
GenBank Accession AL767276 [GenBank]
Graphic View Graphic view of gene At1g31540
Predicted Position of Insertion Chr1:11288434 - go to primer design
BLAST e Value 2e-117
Hit Clone Code (BAC ID) T8E3
Hit Gene Code At1g31540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Disease resistance protein (TIR-NBS-LRR class) family
Insertion Classification TS2TE (3')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37