SimpleSearch - Line and FST details


Line specific information

 
Line ID 218F05
Vector Used pAC161
Line Availability available as T3 set from NASC (N420897)
Segregation Analysis 50:31:24
Confirmed for Hit At4g12210
Parent of DUPLO pair none
Parent of pair(s) 96218, 96219

Gene hit At4g12210

 
Sequence (A. th genome BLAST matches underlined) 
>38-K014211-022-218-F05-8409
NTGATCCATGTAGATTNTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGGAAAA
AGATATATGGAAGACATGAGAACAAGTCATGCGTGTGAGGTCGCTATGGGATCCTCCTAT
AGTGAGACCNNNNNNNANNANNGNTCTTGCTATTGATNNTGGNATTGTGCGTCCTCCCTT
CCCTCTATGGACATATCACATCACTCCACTTGCTTTGAAGACGTGGTTGGAACGTCCTCT
TTTTCCACGATGCTCCTCGTCGGTGGGGGTCCATCTTTGGGACCACTGTCGGCCAGAAGC
ATCTTCAACGATGGCCTTTCCTTTATCGCAATGATGGCATTTGTAGGAGCCACCCTCCTT
TTCCACTCCCTTCACCCTATAGTGACCCATCTGTGGGCACTGGAATCCGA
GenBank Accession AL767355 [GenBank]
Graphic View Graphic view of gene At4g12210
Predicted Position of Insertion Chr4:7281375 - go to primer design
BLAST e Value 4e-13
Hit Clone Code (BAC ID) T4C9
Hit Gene Code At4g12210 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL767355 [GenBank]


Last Updated on 10.06.2021 13:37