SimpleSearch - Line and FST details


Line specific information

 
Line ID 219F11
Vector Used pAC161
Line Availability available as T3 set from NASC (N420999)
Segregation Analysis 50:35:28
Confirmed for Hit At3g02940
Parent of DUPLO pair none
Parent of pair(s) 8980

Gene hit At3g02940

 
Sequence (A. th genome BLAST matches underlined) 
>86-K014212-022-219-F11-8409
TTTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACAATTGAATATATTGGCGGGT
AAACCTAAGAGAAAAGAGCGTTTATTAGAATAATCGGATATTTAAAAGGGCGTGAAAAGG
TTTATCCGTTCGTCCATTTGTATGTGCATGCCAACCACAGGGTTCCCCTCGGGAGTGCTT
GGCATTCCGTGCGATAATGACTTCTGTTCAACCACCCAAACGTCGGAAAGCCTGACGACG
GAGCAGCATTCCAAAAAGATCCCTTGGCTCGTCTGGGTCGGCTATGGGATCCTCCCTTTN
AGTGAGACTATNNNNAGNNNTNNNNTNTTANNTTNCNTTNCTTACTTTGATTAATTATAA
ATTCTATATATGNAAAATTATNATCAANAACAAAAATCATAACACACATCAATATTTTCT
ATTAATTAATCCACCCCCACCGCGCTATANAATTTTTTACTGCTCTCTATTATTACGGAT
CCTACTACAACTTTTTTGCTAACACTGTAAAATTCTATTCGGACAACCCCACTCGACGAA
GAACAAAATTTAACTACCGGATGGTCATGTTTGATTACATAGGTT
GenBank Accession FR805971 [GenBank]
Graphic View Graphic view of gene At3g02940
Predicted Position of Insertion Chr3:662442 - go to primer design
BLAST e Value 3e-26
Hit Clone Code (BAC ID) F13E7
Hit Gene Code At3g02940 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation myb domain protein 107
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37