SimpleSearch - Line and FST details


Line specific information

 
Line ID 220D09
Vector Used pAC161
Line Availability available as T3 set from NASC (N421069)
Segregation Analysis 50:22:18
Confirmed for Hit At5g13600
Parent of DUPLO pair none
Parent of pair(s) 3267, 9674

Gene hit At5g13600

 
Sequence (A. th genome BLAST matches underlined) 
>68-K014203-022-220-D09-8409
NTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATAGATATGACTA
AAAAATTGATGGAGAAGAGAAATGACTAATAACGACAGTTATATGATATGGTCTTAAGAC
ACTTTGATCACTTTTGTTCTTGAATTTTACATGTTTTGCCTTTTTCTTTTATGCAATTCT
TGCTTGCTTATAGGGTTTGAAAGACTACATGCGGACAGTAAAACTATTTTTTAGGTATGA
TAGAAAAAATTGGTCTCCTATGGGATCCTCCCTTAGGTGAG
GenBank Accession AL767582 [GenBank]
Graphic View Graphic view of gene At5g13600
Predicted Position of Insertion Chr5:4382487 - go to primer design
BLAST e Value 9e-107
Hit Clone Code (BAC ID) T6I14
Hit Gene Code At5g13600 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Phototropic-responsive NPH3 family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37