SimpleSearch - Line and FST details


Line specific information

 
Line ID 220F11
Vector Used pAC161
Line Availability available as T3 set from NASC (N421095)
Segregation Analysis 50:20:11
Confirmed for Hit At2g33220
Parent of DUPLO pair 11922
Parent of pair(s) none

Gene hit At2g33220

 
Sequence (A. th genome BLAST matches underlined) 
>86-K014205-022-220-F11-8409
GCTTGATCCATGTAGCATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGGAT
GCCTTGACTGAAAGCATGACCACTTTTGGGAAACCTACCTTCCATTGTGTGGATCTAAGG
AAATGGGCGAAACTTACATGATCGGGCTGCTGGGCTCCTATGGCGTTAGCATCGTATCTG
CCCGATAGTGCGATCAAAACTTCACAGTGATTACCTTGCGCTCATCACGACAGCTGGAAC
AATCACTATGCACCCGAAAGACTACCTTGGTGAGACTGCATCAGATTGTCACATTCTCAC
TCCAAGATAGATAACACTGTGTCTGTCTTATTCCGTACATGATGACTCCAGAACGACACT
AACTAACCTAAATAACTCACAATGTGACCATGTCAAAACCAATATGCAACGAACCCGATG
AGGATCCTCGGATATTACCATATGTTGAAAAGGCTCAATTGCCCTTTGGCCTTCTGAGAC
TGTATCTTTGATATTTTCGGAGTACACAAGCGTGTCGTGCTCCACCATGTTGACGAAGAT
TTTCTTCTTGTCATTGAGTCCGAAGAGACTCTGTATGAACTGTTCGCCAGCCTTTACGGA
GAGCTCTGCTAGGCCCTCTATTTGAATCTTTGACTCCCATGCGAATCGGGGATCCCCTA
GenBank Accession FR805997 [GenBank]
Graphic View Graphic view of gene At2g33220
Predicted Position of Insertion Chr2:14079746 - go to primer design
BLAST e Value 7e-15
Hit Clone Code (BAC ID) F25I18
Hit Gene Code At2g33220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GRIM-19 protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR805997 [GenBank]


Last Updated on 10.06.2021 13:37