SimpleSearch - Line and FST details


Line specific information

 
Line ID 221E10
Vector Used pAC161
Line Availability available as T3 set from NASC (N421178)
Segregation Analysis 50:20:13
Confirmed for Hit At2g37975
Parent of DUPLO pair none
Parent of pair(s) 12322

Gene hit At3g23360

 
Sequence (A. th genome BLAST matches underlined) 
>77-K014206-022-221-E10-8409
TTTGATCCATGTAGATTTCCCGGGACATGAAGCCTTTTGGCCTTTGAGAGAGTTTCTTTT
GCCCGTTTGGTGGAGTTCTGCGAGCGTCCATCCTTTGGGAGCTATGGGATCCTACCTATA
GTGAGACTACGTTTACGTTCCAAACCTTAAAAGACAAGCATTGGAGATTTGGAGATGTTA
TATATTTTATTAAGTTTTTTGCATTTTATATGATAATGAGAAAATTAAGAAAAATAGTCT
ATTTCCTCACAATAATTATCACATCGTATAGAATCCAAATTTTATCCATGATCCTTATGT
TTATGAAGTGATAATTCTATTCTATGGGATCCTCC
GenBank Accession AL767731 [GenBank]
Graphic View Graphic view of gene At3g23360
Predicted Position of Insertion Chr3:8356658 - go to primer design
BLAST e Value 2e-104
Hit Clone Code (BAC ID) MLM24
Hit Gene Code At3g23360 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein phosphatase 2C family protein
Insertion Classification Promoter
Confirmation Status unknown

Gene hit At2g37975

 
Sequence (A. th genome BLAST matches underlined) 
>77-K014204-022-221-E10-8409
TGATCCATGTAGATTTCCCGAACAATAATAAACATTTATTAAGCACTTGTCTTTAAGCTT
TTCTCTGGTTAAAATGATCAAACCCCGTTTTTGAATAAACTCAATCCAAACATTTCTGCA
ACTTCTTTAGCAATTCATTTTATAGTATTTAACTTCAAAAGCTCAGATTTGTATACATTA
TTGTTATGCTTCTTACAACTACAAACACAGTGAAACAAAATAAAAACAAGTTCTTTGAAA
CCAAAAGCAGGAAACTTTGAATCAAATTCATTCAACAGGAATCATGACCTCATTGGTCCT
AAACGGTGGTAACGTCCATGGAGGATTATACCTATGGGATCCTCC
GenBank Accession AL767730 [GenBank]
Graphic View Graphic view of gene At2g37975
Predicted Position of Insertion Chr2:15891925 - go to primer design
BLAST e Value 1e-161
Hit Clone Code (BAC ID) T8P21
Hit Gene Code At2g37975 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Yos1-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37