SimpleSearch - Line and FST details


Line specific information

 
Line ID 221G07
Vector Used pAC161
Line Availability available as T3 set from NASC (N421199)
Segregation Analysis 50:40:38
Confirmed for Hit F12F1 At2g32390
Parent of DUPLO pair none
Parent of pair(s) 4773, 4808

Gene hit F12F1

 
Sequence (A. th genome BLAST matches underlined) 
>55-K014206-022-221-G07-8409
TTTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTATAATTAAATCCTTAAAAACAA
TTAGTAGATAATATCATTTGAGCTTTCTGAGTTAACTGATCGTGTTGTCAGGATCAGGAA
GAGAAAAATAAATCACTAACGGATGCGATCAAGACGTTACTATACTAGGGG
GenBank Accession AL767764 [GenBank]
Graphic View Graphic view of sequence AL767764 of line 221G07
Predicted Position of Insertion Chr1:4027371 - go to primer design
BLAST e Value 1e-59
Hit Clone Code (BAC ID) F12F1
Insertion Classification Genome Hit
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g32390

 
Sequence (A. th genome BLAST matches underlined) 
>55-K014204-022-221-G07-8409
TTGATCCTGTAGATTTCCCGGACTGAAGCCTGGTAACAAAGAAAAGAACCGAGAGTTTCT
TCTCTTTGATGTTTTCGTATGATCTAAATGTAATTGTGTGCATACTGTGAGAGAAGAACA
TTGTTGAGAAGCTAACCTGCAATATTGAAGACTAGAAAGGAAGGGGGTAAAGCAAAGCTT
TAGCACTTGAGCTTAAACTAATCATATGAGTTTTGTGTCGATTCAATAATTGTATGGAAC
TACCAGAAGACTGTAATGATTTGACGCCTATGGGATCCTCCC
GenBank Accession AL767763 [GenBank]
Graphic View Graphic view of gene At2g32390
Predicted Position of Insertion Chr2:13749482 - go to primer design
BLAST e Value 9e-110
Hit Clone Code (BAC ID) T32F6
Hit Gene Code At2g32390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glutamate receptor 3.5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37