SimpleSearch - Line and FST details
Line specific information
Line ID | 223A09 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N421321) |
Segregation Analysis | 50:43:30 |
Confirmed for Hit | At5g04950 |
Parent of DUPLO pair | none |
Parent of pair(s) | 18379, 72424, 72425 |
Gene hit At5g04950
Sequence (A. th genome BLAST matches underlined) | >65-K014241-022-223-A09-8409 CTTTGTTCGGACAACTCGTGTCCACGTGCTTACCCACGGATACAAACATCGATGTCACAA ATATGTGTGAAGAAGTCAAAGACATGAGAGCTAATCTCATCAAGCTTTGTGGTGAAGCCG AAGGTTATTTAGAGCAACACTTCTCCACAATTTTGGGATCTTTACAAGAAGACCAAAACC CACTTGACCATTTACACATCTTTCCTTACTACTCCAACTACCTCAAGCTAGGTTAGTCGA GGTTTTTTCGAGAACTAGCAAACCGGG |
GenBank Accession | BX890889 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr5:1458787 - go to primer design |
BLAST e Value | 3e-128 |
Hit Clone Code (BAC ID) | MUG13 |
Hit Gene Code | At5g04950 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | nicotianamine synthase 1 |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |