SimpleSearch - Line and FST details
Line specific information
| Line ID | 223C06 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N421342) |
| Segregation Analysis | 50:30:30 |
| Confirmed for Hit | At1g62960 |
| Parent of DUPLO pair | 2454 |
| Parent of pair(s) | none |
Gene hit At1g62960
| Sequence (A. th genome BLAST matches underlined) | >43-K014237-022-223-C06-8409 TTGATCCATTGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGCTTAT AATATCTTATCTTGTGCACTAATGAGTGAATACATTTACTCAATCTATACTATCTTTTTA AGATTTACATACATCGTCAAAAATTTGCAATATCAAACCACCACAGACACAAAAGAGAAT GGACAGAATAATAACAAGTACTGCTGATTGTGATGCTTTGGTTGTGGCTAACAAAATCGG GATCATCTAATTTGATCATGCGTCACTCGGTGATTTCACTTTTGGGATTGAAACAGACTT CTGGTTTTTGTCCTTCCATAGTCTTCAGTTTTGCTATGGGATCCTCCATTNATGGAGACT ACACNTTTTCTCTGTCAACATCTATAAGTCGTATCAAAGACTGCATTCCTTTGGTGATCA GCCTAACAGCATGCACAACCTGTGCAATGCTCGGGCTNTTTAATGGGATTCCTGGTGTGC AAACCAAACCTAATCTCATCACTTGCATCAGCTAATTCTCTTCAAACCCTCTCAATCTTC TGGGAGAACCATCAGTAGGCCCAACCTGTCTTCCACAAATTTCCTCACGTGATCCC |
| GenBank Accession | AL767943 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:23318397 - go to primer design |
| BLAST e Value | 8e-30 |
| Hit Clone Code (BAC ID) | F16P17 |
| Hit Gene Code | At1g62960 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ACC synthase 10 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g55290
| Sequence (A. th genome BLAST matches underlined) | >43-K014237-022-223-C06-8409 TTGATCCATTGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGCTTAT AATATCTTATCTTGTGCACTAATGAGTGAATACATTTACTCAATCTATACTATCTTTTTA AGATTTACATACATCGTCAAAAATTTGCAATATCAAACCACCACAGACACAAAAGAGAAT GGACAGAATAATAACAAGTACTGCTGATTGTGATGCTTTGGTTGTGGCTAACAAAATCGG GATCATCTAATTTGATCATGCGTCACTCGGTGATTTCACTTTTGGGATTGAAACAGACTT CTGGTTTTTGTCCTTCCATAGTCTTCAGTTTTGCTATGGGATCCTCCATTNATGGAGACT ACACNTTTTCTCTGTCAACATCTATAAGTCGTATCAAAGACTGCATTCCTTTGGTGATCA GCCTAACAGCATGCACAACCTGTGCAATGCTCGGGCTNTTTAATGGGATTCCTGGTGTGC AAACCAAACCTAATCTCATCACTTGCATCAGCTAATTCTCTTCAAACCCTCTCAATCTTC TGGGAGAACCATCAGTAGGCCCAACCTGTCTTCCACAAATTTCCTCACGTGATCCC |
| GenBank Accession | AL767943 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:20503740 - go to primer design |
| BLAST e Value | 9e-110 |
| Hit Clone Code (BAC ID) | T26I12 |
| Hit Gene Code | At3g55290 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | NAD(P)-binding Rossmann-fold superfamily protein |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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