SimpleSearch - Line and FST details


Line specific information

 
Line ID 224D12
Vector Used pAC161
Line Availability available as T3 set from NASC (N421456)
Segregation Analysis 50:31:21
Confirmed for Hit At4g31330
Parent of DUPLO pair none
Parent of pair(s) 2722, 83948

Gene hit At4g31330

 
Sequence (A. th genome BLAST matches underlined) 
>92-K014238-022-224-D12-8409
CTTGATCCATGTAGATTTGCCCGGACATGAANGCCTTTACAATCGATTCTTTCTTGTACC
GTAATATTAAAAATTAGCTTTTTTTTTAAATGATTTAGGTGTGTGGATGGATAGGGATGA
CTCTTATTATTTGGGTCCTTAAGCCTTCCATGAAGACTTACTCAAAAAGCGGTTTCTTTC
TATGAATATTCAACTTGGATAACTTGAGAACATTAAAGTGGACTGGAATNAATGTGATTT
AGATGTGATATTGGTGCCGCTATGGGATCCTCCCT
GenBank Accession AL768089 [GenBank]
Graphic View Graphic view of gene At4g31330
Predicted Position of Insertion Chr4:15202195 - go to primer design
BLAST e Value 2e-06
Hit Clone Code (BAC ID) F8F16
Hit Gene Code At4g31330 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transmembrane protein, putative (Protein of unknown function, DUF599)
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T18N24

 
Sequence (A. th genome BLAST matches underlined) 
>92-K014242-022-224-D12-8409
TTGATCCATGTAGATTNTCCCGGACATGAAGCACTTTACAATTGAATATTTCCTGTCCGG
GATAATAAAAAATTTGCTTTTTTGAGAAATGACTTAGGAGGTGGATGGATAGGGATGACG
TGGCATATATTGGTCCTTTTGCCCTCCATTGTTATTTACCAAAGAGATCTCTCTCTCTTT
TATTATTCTTCTTTGACAACAAGAGATCACTATGGGATCCTGCCATNAATGAGATTTAGA
TGTGATATTGGTGCCCCTATGGGATCCTCCCTATAGTGAGANGACACACNNACGGCTTTC
CTTCTCATCTTAGGGCATAGGGCGTTTCACCCTTTCCTTTGAATCACAATGCCTAACTTC
TTTGAATTCCAAACCCTTTACTAAACTAACACTTTTTTTGTATCCCCCTTTAAAACTCTA
AACCCTTACTCTCTTT
GenBank Accession AL768090 [GenBank]
Graphic View Graphic view of sequence AL768090 of line 224D12
Predicted Position of Insertion Chr1:14265443 - go to primer design
BLAST e Value 2e-43
Hit Clone Code (BAC ID) T18N24
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37