SimpleSearch - Line and FST details


Line specific information

 
Line ID 224G05
Vector Used pAC161
Line Availability available as T3 set from NASC (N421485)
Segregation Analysis 100:49:38
Confirmed for Hit At4g14410
Parent of DUPLO pair 2547
Parent of pair(s) none

Gene hit At4g14410

 
Sequence (A. th genome BLAST matches underlined) 
>39-K014238-022-224-G05-8409
TTGATCCATGTAGATTTCCCCGACATGAAGCACTTTACAATTGAATACTATGCTATCCTC
CCTAGTACGCGTAGTGCACCCGGTGGAGCTAGCATGTTGGTTTCTACGCAGAACTGACCC
GGATACGCATATTATTTTCATTGATAACTGAGCCATGTGCACCTTGCCCTCAACACCGAG
AACGACGGGAAACATGCCAATGTAGACTTTAACTGATGATCTGTCTTATCTTTATCCGCC
TTCAACACCATTCTTTTGCTCCATCAGCTTGTTCTTCTCCGCCTATAAAGAAACATACAA
ACTTAGAAATCTGTTCACATCCCATTGAACAAGATTCTTGGTTTAGGTGAAAGTGAATGA
ACAACCAACCTTGAGACTCTTGATCTCCTCTAAAAGCTTCTGGTTAGTTTCTTCAAGCTT
AAGAGCTTCATCTCTAAGTTGATTCAATATACGGATTGCATCATCGAGTATAGCCGGTTT
ATCAGTCTTAGGAGGTCCTCCAGGCTCCAAAACCGAGCTCAAATCCATAAACCTAACAGA
ACAACAACAATTTTTTTCCCCTTGAGACCACTCACTTCACAACACAAAAACATAGACTAA
GCTCTAAACATACCTCTCATTTAGCTTGTCCCTCCTCAACCTTTTACGACACGCCTTTAG
TTCCTCCTCCTCTGGTACACGAACCAGTCCTTGGCCTATGAACAACCATTCACAGATTCC
ATTAAAAAACCAACCCACTACC
GenBank Accession AL768127 [GenBank]
Graphic View Graphic view of gene At4g14410
Predicted Position of Insertion Chr4:8301339 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g14410 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37