SimpleSearch - Line and FST details


Line specific information

 
Line ID 225B03
Vector Used pAC161
Line Availability available as T3 set from NASC (N421519)
Segregation Analysis 34:32:14
Confirmed for Hit At5g66560
Parent of DUPLO pair 11786
Parent of pair(s) none

Gene hit At5g66560

 
Sequence (A. th genome BLAST matches underlined) 
>18-K014239-022-225-B03-8409
NTGATCCATGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCGGACATGG
TTTCTCTCTCATTCCGTCTACAAAAGCTTGCGTGAATCCATAAAGGCTCTCAAAGCTTGT
GAGTCACTGTCTCCTTTAACCGGATCGCTTGGTATATACGGAACAGAGCATCTACTCTAT
AGAATCCAGAGCTACCTCAGCTGATCCTCCACTCTTCGGATGGCCGGTAAACGATGGCGG
CGGAAGAAGAAACATCTCCGGCACCGATCTGCAACTTATACCCGGCGGCGCGGCGAAATC
TCGAAAGAAACCGAGTAGACATTCGAACATGGAGCTGTGGTTTGAACATCTGACGCAGCT
GAGTCTTCCGATCTTAAACCTGGGATCCTATCAATGAGATCAAGAGATCTGAGCTCCGAT
GTCATAGAGAGCTGTTTGATTTGTTACGCTAACAACCACATGCGCGGGATTCTACGCTCT
ATCGGGAAACCG
GenBank Accession AL761400 [GenBank]
Graphic View Graphic view of gene At5g66560
Predicted Position of Insertion Chr5:26565061 - go to primer design
BLAST e Value 3e-168
Hit Clone Code (BAC ID) K1F13
Hit Gene Code At5g66560 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Phototropic-responsive NPH3 family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL761400 [GenBank]


Last Updated on 10.06.2021 13:37