SimpleSearch - Line and FST details


Line specific information

 
Line ID 225F06
Vector Used pAC161
Line Availability available as T3 set from NASC (N421570)
Segregation Analysis 50:12:12
Confirmed for Hit At5g27930
Parent of DUPLO pair none
Parent of pair(s) 3323, 8087

Gene hit At5g27930

 
Sequence (A. th genome BLAST matches underlined) 
>46-K014239-022-225-F06-8409
ATAATATTGCCGGTCGACACACTTGTATATTAAGTTAAAATCCGAAAGATCATACTTAAC
AAACCTTCCATATCTTTTACCTTTACACATTTGCAATATCTAATGTCGTATCATTTTGGA
GCTATGGGATCCTACCTATCTAGAGATCAAAGCCGAACCAAAACCACTCAAGTCGATTCA
TAATAGATTTATATACCAATGAGTAATTTTCATTAAACCAAAAAACTCAAACCAAGGAAA
ACCTAAATTCGGATTAAAAATTCCTAAATCAAATAAACAATATTCCAATTTGCTTTTCTT
TTGGTATTACCAAGTCTCTTATTCAAATGTGGTTATTTCTTTTCTTTTTCAAATTGACTT
TTTATAACTTTTTGAACGTTTTAAGAGTGTGGATGAGTATATTTTGTTTGTGTAAAGGTT
TATAAGTATTTACCCCATCACTGGCCAAGATTATGAAGTGGTCTTTAGTAGAGATGTGTC
TTTGAGTGACTTCAGGGACTGAGACCACATCATACTCTTTAATACAGTAGTCTCCCAATG
CTCTTGACATTGCGAGCCCCGGTGTTTTTGCGGCTGGCTGCCACACACGAAGGACTCCCG
GCTCAT
GenBank Accession AL761456 [GenBank]
Graphic View Graphic view of gene At5g27930
Predicted Position of Insertion Chr5:9958470 - go to primer design
BLAST e Value 8e-107
Hit Clone Code (BAC ID) F14I23
Hit Gene Code At5g27930 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein phosphatase 2C family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL761456 [GenBank]


Last Updated on 10.06.2021 13:37