SimpleSearch - Line and FST details


Line specific information

 
Line ID 225F07
Vector Used pAC161
Line Availability available as T3 set from NASC (N421571)
Segregation Analysis 100:58:45
Confirmed for Hit At4g32830
Parent of DUPLO pair none
Parent of pair(s) 1696, 2974

Gene hit At4g32830

 
Sequence (A. th genome BLAST matches underlined) 
>54-K014239-022-225-F07-8409
CTGATCCATGTAGATTTNCCCGACATGAAGCACTTTACCGGACACTGCTAAATGCTTTTT
AACAGTGACCTTTTGGATTGTTTTACGGTCGAAAGCGTAGAACATGATGCTATGGGATCC
TCCCTATAGGGAG
GenBank Accession BX890891 [GenBank]
Graphic View Graphic view of gene At4g32830
Predicted Position of Insertion Chr4:15843838 - go to primer design
BLAST e Value 8e-24
Hit Clone Code (BAC ID) T16I18
Hit Gene Code At4g32830 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ataurora1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g35670

 
Sequence (A. th genome BLAST matches underlined) 
>54-K014243-022-225-F07-8409
ATATTCTTTACTCTTTATAATGGGTCAAGGTCTGCCGTTACAACCCTACCTTCCTAACTA
TGGGATCCGGCATATACGAGGGGGGGGGGNACCTCTGGCTCCCTCCCCACATTGCAAGGG
ATAGTGCCAAAGAGGAGCCGCTACGCCAATGAAGAAAACCCCCATAACGGAATAGGACAC
CGGCCCGATAGGAGACCCGCTACCGCCATATGCTAGAACAGAGCGACGGCATCGACCGCC
AAAGAAATATATTTACATA
GenBank Accession AL761458 [GenBank]
Graphic View Graphic view of gene At2g35670
Predicted Position of Insertion Chr2:14992369 - go to primer design
BLAST e Value 4e-10
Hit Clone Code (BAC ID) T20F21
Hit Gene Code At2g35670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation VEFS-Box of polycomb protein
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37