SimpleSearch - Line and FST details


Line specific information

 
Line ID 226C09
Vector Used pAC161
Line Availability available as T3 set from NASC (N421633)
Segregation Analysis 50:35:24
Confirmed for Hit At2g17890
Parent of DUPLO pair none
Parent of pair(s) 5334, 5415, 81969, 82102

Gene hit At2g17890

 
Sequence (A. th genome BLAST matches underlined) 
>67-K014265-022-226-C09-8409
CTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAAACTTTTTGCCTACT
TTGTTACATAATGGGTAGATCAAAGAAGTGATATGTCAAGAAAAACTTTAAATCTCTTTG
CTACTAACCTGGCTTTATGAAGTCAGATAAACCGAAATCAGTTGCTTTTATAGGCGAATC
TTCTTCGGTTGATTGGAACAGAAAATTCTGTTTGAGAAGATGATTAGTAAAAAACAATAC
TTGTGAATAAAACCAACTATACACATTCAGAAACATGATGATGGAGTAATTAAGCTACCT
CTGGTTTCATATCTCGGTGAACCAAACCGCGTAAATGACACTCAGCCGCAACTTTCAGCA
TTTGTCTCACCACCACGGCCGCGTATCTCTCGCTATAACGGCTATCCTTCCTGGAAACAA
GCAACAACAATAGCTTAATTACTCAAAAAGTAATAAGACTCTAGAATTTTAGTAACACAC
ATGTAAACGTATTACTAAAGTTACCTGGCTAAAATACGATCAAGTAATTCACCACCCTCG
CATAACCTATGGGATTCTCCTTNNNTGGGAGAAATTTANCCGCCTTAAGCACTTCGCTTT
TAGGGTAATCAAGAAGAGAAGATTGGGTTTCATTTGAGTTTC
GenBank Accession CR356291 [GenBank]
Graphic View Graphic view of gene At2g17890
Predicted Position of Insertion Chr2:7771292 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T13L16
Hit Gene Code At2g17890 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation calcium-dependent protein kinase 16
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR356291 [GenBank]


Last Updated on 10.06.2021 13:37