SimpleSearch - Line and FST details


Line specific information

 
Line ID 227B06
Vector Used pAC161
Line Availability available as T3 set from NASC (N421714)
Segregation Analysis 50:44:15
Confirmed for Hit At1g06390
Parent of DUPLO pair none
Parent of pair(s) 4976, 5059, 8570, 84634, 84646, 84652, 84658, 84659, 84660

Gene hit At1g06390

 
Sequence (A. th genome BLAST matches underlined) 
>42-K014262-022-227-B06-8409
CTGATCCATGTAGATTGTCCTGACATGAATGCCTTTACAATTGAACTATATACTCGCATC
TGTCTGCATATCGCGGTTTCACTTGTCTGCGTCCTACACCGGGAACACTCTGGATTTATA
CCCAAGCCTTTAACTATCTGATCTATAGGAATGGCCTATGCGATGATAGTGGGATTCGTA
GTATATTATATTACTTGTGAGAACTAACTGCATATATCAGCTCGTTCTTGATATGTGTAA
GGCTTGACATATATATTCGGCATGCTCTGATTAGGAGCTGGGGATCCTCCGTTCACCGAG
GCGGCAGAGGCATCTTCAACGATGGCCTTTCCTTTATCGCAATGATGGCATTCGCAGGAG
CCACCTTCCTTTTCCACTATCTTCACACCACAGTGACAGATAGCTGGGCAATGGAATCCG
AGGAGGTTCCCGGATATTACCCTTCGTTGAAAAGACTCAATTGCCACTTGGGTC
GenBank Accession FR806119 [GenBank]
Graphic View Graphic view of gene At1g06390
Predicted Position of Insertion Chr1:1949015 - go to primer design
BLAST e Value 4e-10
Hit Clone Code (BAC ID) T2D23
Hit Gene Code At1g06390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GSK3/SHAGGY-like protein kinase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR806119 [GenBank]


Last Updated on 10.06.2021 13:37