SimpleSearch - Line and FST details


Line specific information

 
Line ID 227H12
Vector Used pAC161
Line Availability available as T3 set from NASC (N421792)
Segregation Analysis 50:20:15
Confirmed for Hit At2g21230
Parent of DUPLO pair 2330
Parent of pair(s) none

Gene hit At2g21230

 
Sequence (A. th genome BLAST matches underlined) 
>96-K014262-022-227-H12-8409
NTTGATCCATGTGAGATTTCCCGGACATGAAGGCCTTTACAATTGAATATATCCTGATGC
ACTATATATAATATAGAAAAAACGATTCTTTTGAAGCGTCGACCTAAGCAGCAATCATCC
ACTGGTCGGAAAAGACTAGCTTGGCGATAATTACATATAGAGTATGTTTATTTCTCTATC
AAATTCAACAAATGGGATAAGAATAAAAATTAATCTCAATAACAAAAAAATGAAAGAACA
AAGCTTTAATGAAATAAACTAAACAAAAATATTAAAAAAAAATCATATTGTCTGAACCCT
CTCACGGTTACAAATTTATAATCATATATAGATAAATCTAAAACAACTTGAAGACATGTT
TAATCCTTTAGTTATGTCCATAAAATTCATGGTTTGGTTGCTCATGATTAAACTCGTTGA
CATTGCATTGCTCTTTGAATATGTTTGGGTCCAATTGCTGGTGCTGATTGAACTCATAGG
TGTTGAGTTGCGGCTGGAACACGTTTTGGTCCGATTGATGCATGGGTGAACCCTCGAACT
GGTTGGGATTTTTCATCCCCTGACCAGTTGCTACTTTAAATCGGTTGATTTCAGCAAGGA
GCTCTCCACTTTGGTTCAGTGGGTTCAAGAATTGAGAATAGTCGACACTCCCTCGGTAAT
TTGGCCTCCTTTTCTA
GenBank Accession AL761739 [GenBank]
Graphic View Graphic view of gene At2g21230
Predicted Position of Insertion Chr2:9096283 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F7O24
Hit Gene Code At2g21230 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Basic-leucine zipper (bZIP) transcription factor family protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL761739 [GenBank]


Last Updated on 10.06.2021 13:37