SimpleSearch - Line and FST details


Line specific information

 
Line ID 228A08
Vector Used pAC161
Line Availability available as T3 set from NASC (N421800)
Segregation Analysis 50:12:4
Confirmed for Hit At4g09990
Parent of DUPLO pair none
Parent of pair(s) 4303, 4433, 4516

Gene hit At4g09990

 
Sequence (A. th genome BLAST matches underlined) 
>57-K014263-022-228-A08-8409
TTGATCCATGTAGACTTGCCTGGACATGAAGCTCTTGTACCTACTGATTATGCACGCCAG
GCTATACACTTTATGCTTCCGGCATTGTATGTTGTGTGGAAGTGGGAGCGGTATACACCT
TTCCACTTGAATCACCTATGACATGATTACGAATTCGTGCTCGGAACCCTTGGATTGTGG
CTTTACGAATCACATGTTGTATTGATATAAGTATTTCACCAATTCAAATACATACTACGG
GTGTCTTATATGCTCAACACATGAGCATAAACCTTATAGAAACGATAATTCCCTTATCTG
GGAACTACTCACACATTATTGACGAGAGAGATCGATTTGTGGAGAGAGACTGGTGATTTC
AGCGGGCATGCCTGCAGGCCGACCTGTATCCAACGTATGGGATCCTTATGNAGGCGTGGA
GATCACACCACAACAAACGTTTGATGAAGTCTCAGTCTCAAAGAGAGTCTTGGACAAGAA
GTCTCCTTGTAACTTCCTCGTCTTTGGCTTAGGACACGATAGCTTGATGTGGGCATCTCT
CAATCACGGTGGACGCACTTGTAAGCTTTTCATAGCAACAGATCTATGAAGATTAATCAT
ATCTCTGTTTTTCATTGATAACGGTACTTCTTACATTGCTATGGGATCC
GenBank Accession AL761751 [GenBank]
Graphic View Graphic view of gene At4g09990
Predicted Position of Insertion Chr4:6259839 - go to primer design
BLAST e Value 6e-111
Hit Clone Code (BAC ID) T5L19
Hit Gene Code At4g09990 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37